| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1738 |
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| Symbol | |
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| ID | 6116001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2160567 |
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| End bp | 2161487 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641633242 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001760118 |
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| Protein GI | 170726092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.218228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTG ACATAATTAA ATGCGGTATG TTGTCGCTAT TACAAGATTA TGGGCGTTAC
GGGTATCAAC ACATTGGTGT TACTTCTGGG GGGCCGATGG ATGAACATGC TTTTTTATGG
GCAAATAAAC TATTAGATAA TGTTGCTAAT GCGACTCAGA TTGAAGTTAC GTTTGGTGGA
CTAGTATTGC TTGCGACTAA GCCTACTGTG ATTGCGATAA CAGGTGCAGA TTTAGGTGCT
TATATAAATA AGAAAGCGGT AAAACCTTGG AGAACCTATA ATATTTCAGT TGGCGATACA
ATTATGTTTA ATCAACCTAA TACTGGCTTG CGATCATATC TTGCCGTAAA AGGTGGATTC
CACGTAGAGC CTCACCTCGG CAGTTCTGCA ACTGTGGTTA GGGAAGGGAT TGGTGGTATT
GAACGAAATG GGGTGAAGCT TGAGGCTGGT GATAAGCTAA AGTACTCACC TTACACAAAT
CAATATTTTC GTTCTGTTTC TTCTCATTTT ATTCCTGACT ACTCAGCGAC AATTGAGCTC
GGGGTCATAC CATCGTATCA ATTCGATGGT TTTTCTAAGC ATCAAATTAA TATTTTCTTT
AGTTCTACAT ATGAAATATC TAATCAAATT GACCGGATGG GTTACCGTTT AAAGGGAGAG
CCTATTTCGT ATGACGGTAA TGGCATTATT TCTGAAGGGA TCTCTATGGG GGCGGTGCAA
ATCCCTCAAG ACGGACAGCC AATTGTATTA CTTCGTGATA GGCAAACGAT TGGTGGATAT
CCCAAGATAG GCTGTGTTAG TGCTTTAGAT TGTAACTTGT TAGCGCAAAA GAGATCTGGG
GACACCATCA CTTTTAAATT GATTGACCTA CAACATGAAC AGGGTAGGAG GTGTATCTTC
AATAGATTTT TCTTTGATTG A
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| Protein sequence | MSFDIIKCGM LSLLQDYGRY GYQHIGVTSG GPMDEHAFLW ANKLLDNVAN ATQIEVTFGG
LVLLATKPTV IAITGADLGA YINKKAVKPW RTYNISVGDT IMFNQPNTGL RSYLAVKGGF
HVEPHLGSSA TVVREGIGGI ERNGVKLEAG DKLKYSPYTN QYFRSVSSHF IPDYSATIEL
GVIPSYQFDG FSKHQINIFF SSTYEISNQI DRMGYRLKGE PISYDGNGII SEGISMGAVQ
IPQDGQPIVL LRDRQTIGGY PKIGCVSALD CNLLAQKRSG DTITFKLIDL QHEQGRRCIF
NRFFFD
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