| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1732 |
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| Symbol | |
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| ID | 6115995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2155767 |
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| End bp | 2156846 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641633236 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001760112 |
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| Protein GI | 170726086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.21925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAT TATCTAAGAT TTTTTTTACA AGTATGTTGT TACTCAATAC CAACGCTATA
TTTGCTAGTG ACAATAACAA GGCGCCGAGC AATGTTCAAA TTGACAATGT TAATGTTTCG
GTTGTTGGAA CTTGGAGTAT GTTGTCTCAG TATAAGCAAT TTGAGCGCCC TTTTTGGGAT
GAAACGATTA CAGAGAATAG TAATGGTGCC GTCATTGCTG ATGTAAAAGG TTTTAATGAG
ATGGGATTAA AGGGAAGTGA AGTTGTCAGG TTGATGAAGA GTGGTGTTAT AGATTTTGGT
TCTACAGTGC TAGGTTATTT GGCTGCAGAC AACCCCAAAA ATGAAGCGAT AGATTTAGCT
GGATTAAGCC CCAATATAGA GACTGCAAAG ATAGTTTCCG ATGCATATAA GACTGAGCTT
AGCGAGTTAT ACAATAAAAC ATACGATATT AAGCTACTGG GACTATGGCC GTATTCAGCT
CAGGTTCTGT TTTGTAATGT ACCAATAACA GGACTTTTGG ATTTAAAAGG CAAAAAAATT
CGTACATCAA ATAGAACCCT TGCTGAGTTT GTTGGTGCAT TGGGAGGGGT CGGTGTAACG
ATGTCGTTTG GTGAAGTGGT ACAGAGTTTA CAGAAGGGGG TAGTTGATTG TGCTATTACG
GGCTCAATGT CTGGCTATAA CGCAAAGTGG CATGAGGTAA CAACCCATTT ATATACCTTA
CCATTAGGTT GGGCCAATGT TATGCACGCT GTGAGTAATA AAGCTTGGAA TAAGTTACCG
AAAGCGACAA AGGATTATAT TGAACAAGAG ATTAATGGCC TAGAAAGTGA CATATGGAAA
GGCGCAGCAC TGGAAACTGA ACAAGGAATT GCCTGTAATA CTGGTCATGG TAAATGCCAA
TCTGGTGAAC CTGCAAGTCT AATATTAGTC GAGTATACCG AGGGTGAAAG TATGTTATTG
GATAATATTT TAAGTGATCA TGTTTTACCG TTATGGGCAG AACGTTGTGG TAAACCTTGT
ACAAATAAAT GGAATGAAAC GATTGGTAAA GCAATAGGGA AAGACATAGA TACTAAATAA
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| Protein sequence | MNVLSKIFFT SMLLLNTNAI FASDNNKAPS NVQIDNVNVS VVGTWSMLSQ YKQFERPFWD
ETITENSNGA VIADVKGFNE MGLKGSEVVR LMKSGVIDFG STVLGYLAAD NPKNEAIDLA
GLSPNIETAK IVSDAYKTEL SELYNKTYDI KLLGLWPYSA QVLFCNVPIT GLLDLKGKKI
RTSNRTLAEF VGALGGVGVT MSFGEVVQSL QKGVVDCAIT GSMSGYNAKW HEVTTHLYTL
PLGWANVMHA VSNKAWNKLP KATKDYIEQE INGLESDIWK GAALETEQGI ACNTGHGKCQ
SGEPASLILV EYTEGESMLL DNILSDHVLP LWAERCGKPC TNKWNETIGK AIGKDIDTK
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