| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1729 |
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| Symbol | |
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| ID | 6115992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2151872 |
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| End bp | 2152747 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641633233 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760109 |
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| Protein GI | 170726083 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0978912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.139934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTA AACGTCTTGA AACATTTATG TGGGTTGCTG TTCTAGGAAA TTTCCGACTA
ACAGCCGAAA AAATGAATAC AACTCAACCT TCCATATCGG CACGGATTAT TGCATTAGAA
GAAGAGTTAG GGGTAAAACT GTTTGAACGT GATAACAGCC CAGTATCTTT AACATCGAAA
GGGCAAGAAA TATTACCGTA TGTAAAAAAA ATAATGCATA TGACGGAGCA ATTAAAGGAG
GTAGCTGATG AAAACTCACC ATTATGTGGA TTATTACGAC TAGGCGTATC TGAAACTATT
GTTCACACAT GGTTACCTAC ATTTTTGAAC AAAATTCATA ATTTATTTCC TAAATTAGAC
GTAGAAATAA CCGTTGATGT CACTACCAAT TTACGAGAAG GACTGCTTTC ACAATCATTG
GATTTAGCTT TTTTAATGGG CCCGGTATCA GACAGTAAAA TTGAAAATGT AGATTTGTGT
GAGTTCTCAC TGATATGGGT AGCGAACCCA AAATTAGGTA TGGCAAAAAT GACAACATCA
ATAGAGCAAT TAAGCCAGTG GCCAGTCATT ACTTATGCCA GAAATACACG TCCATATGAA
GACATAAGCA ATAAATTTCG TGAATTAAAC ATTCCACCAC CTAGACTATT TTCATGCAGC
TCATTATCTG CATGTTTGCG CATGGTAACT GATGGGATAG GCGTTAGCCC ATTACCCAAA
CAAATGATTA ATACTGAATT GGCCAACGGA AAGCTAGAAA TAGTGGATAC GAACTGGGTG
CCTAATAACT TACATTTCAC AGCATCTTAT CCTAAATCCC CATACAATGG CTTGATAAAA
AAAGCCATTG AATTAGCCCT TGCCGTGGGC AAATAA
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| Protein sequence | MNFKRLETFM WVAVLGNFRL TAEKMNTTQP SISARIIALE EELGVKLFER DNSPVSLTSK
GQEILPYVKK IMHMTEQLKE VADENSPLCG LLRLGVSETI VHTWLPTFLN KIHNLFPKLD
VEITVDVTTN LREGLLSQSL DLAFLMGPVS DSKIENVDLC EFSLIWVANP KLGMAKMTTS
IEQLSQWPVI TYARNTRPYE DISNKFRELN IPPPRLFSCS SLSACLRMVT DGIGVSPLPK
QMINTELANG KLEIVDTNWV PNNLHFTASY PKSPYNGLIK KAIELALAVG K
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