Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1717 |
Symbol | |
ID | 6115958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2132752 |
End bp | 2134290 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633199 |
Product | transcriptional regulator, TyrR |
Protein accession | YP_001760097 |
Protein GI | 170726071 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0924864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0289301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTGG AAGTATGTTG TTTGGACCGA GTGGGTCTAG CTAAAGATAT TTTAATGATT TTAGAAGGTT ATGGCATTAA CCTACTCGCC ATTGATGCCA GTAATCAAGG GTTTCTCTAT CTACAGTTTG CAGAAGTAAA CTTTGATACC CTCAGTGAAC TACTGCCTTT GATCCGAAAA GTTGAGGGGG TACATGATGT CCGTACAGTC TCTTTTATGC CATCAGAGCA GGAGCACTAT GCGTTAAAAA CCTTGCTGAA AACCTTGCCC GATTCTGTTT TCTCTATCGA TGTGAAGGGA AGAGTTCGGA TCGTGAATGA GTCGGCTATT ATGACCATTG GCATGCAAGA GCATGAGATC TTGGATGAGT CCCTCAACCA TTGGGTACAA GGGTTTAATT TTAGCCGTTG GTTAAGTGAA AGCTTAGTAT TGGCTCAGGC GACACGAGTC AATATTGGTC AGAATGAATA TCTGGCAGAG ATGCTCCCAA TTTACCTGCC TGATGAGAAT GATAAATCGA TTCTTGCGGG CGCCGTTGTA TCACTTAAAT CACCAGCTAG AGTGGGCAAG CAATTCAATG CGCTACAGAA TCAAACTGTT GGTTTTGAGA ATGTACTGGC GACCAGCGAT AAGATGAAAG AGGTGCTTGT ACAGGCACGC CGAATGGCTC AACTTGATGC GCCACTGCTA ATCACAGGAG AAACAGGTAC GGGTAAAGAG CTAATGGCAC GAGCGTGTCA TGATGCCAGT ATGCGCAGAG AGTATCCGTT TATCGCGATA AACTGTGCAG CCTTGCCAGA TAGCGCCGCT GAGGAGGAGC TATTTGGTTA TGTGAGAAAC GGTGAGGTGA TTAAGCGAGG CTTCTTTGAA GAGGGTAAAG GCGGCACGGT TTTTCTCGAT GAGATAGCTG AAATGTCTAA ATCTGCTCAA GTTAAGCTAT TGCGTCTGTT ACAAGATGGA ACGTTCAGAC GTTTGGGTGA AGATCAGGAG GTGAGAGCAG ATGTTAGAAT AATCTGTTCT ACCCAGAAGA ACTTGGCAGA GCTGTGTCAG ACAGGTGATT TTAGAGAAGA TCTTTATTAC CGTATCCATG TATTGAGTTT CCACCTTCCA TCGCTTCGTG AACGTAAGAT TGATGTTATC CCGCTGACTG AGATGTTCCT TGAGCACTAT AGCCAGCAAC TTTCAATCCC TATTCGCCGG ATCTCTGCTC AGTGCCGTGA GCACTTACTC AATTACGCTT GGCCAGGTAA TGTTAGACAA CTTAAAAATG CTATTTTTAG GGCAGTGTCT ATGTGGGATG GCTCTGCTGA GCTTACGGTT GAGCAGTTGA AACTGCCTTC ATATGCTGAG GGTTTCGGTT ATTTTGATCA TCAATTTGAG GGAAGCCTAG ATCAGGCTAT GAAGCAATTT GAGGCCAGTC TGCTTAGAAG GCTCTATCCT GCCTACCCAA GTACTAGACA GTTAGCGAAG AAGTTAGGTG TGTCGCACAC TGCGATAGCG AACAAGTTAA GAGAGTATAA GATCAGTAAA CAGAAGTAG
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Protein sequence | MRLEVCCLDR VGLAKDILMI LEGYGINLLA IDASNQGFLY LQFAEVNFDT LSELLPLIRK VEGVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKG RVRIVNESAI MTIGMQEHEI LDESLNHWVQ GFNFSRWLSE SLVLAQATRV NIGQNEYLAE MLPIYLPDEN DKSILAGAVV SLKSPARVGK QFNALQNQTV GFENVLATSD KMKEVLVQAR RMAQLDAPLL ITGETGTGKE LMARACHDAS MRREYPFIAI NCAALPDSAA EEELFGYVRN GEVIKRGFFE EGKGGTVFLD EIAEMSKSAQ VKLLRLLQDG TFRRLGEDQE VRADVRIICS TQKNLAELCQ TGDFREDLYY RIHVLSFHLP SLRERKIDVI PLTEMFLEHY SQQLSIPIRR ISAQCREHLL NYAWPGNVRQ LKNAIFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDHQFE GSLDQAMKQF EASLLRRLYP AYPSTRQLAK KLGVSHTAIA NKLREYKISK QK
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