Gene Swoo_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1714 
Symbol 
ID6115955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2130133 
End bp2131050 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID641633196 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001760094 
Protein GI170726068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00169518 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.555364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC ATAAAATTTG CAAAGCTGTT ATTCCTGTCG CGGGACTTGG AACAAGGATG 
CTTCCGGCAA CGAAAGCGAT ACCTAAAGAG ATGTTACCCG TCGTTGATAA ACCGCTTATT
CAATATGTTG TCAATGAAGC AATTAACGCT GGGATCAATG AAATCGTACT TGTTACCCAT
GCCAGTAAAA ATCCCATCGA AAACCATTTT GATACCAGTT TTGAACTTGA AGCCCAACTC
GAAAGACGAG TAAAACGTCA ACTGTTATCC GAGATCCAAT CTATCTGCCC TAGGGGTGTC
ACCGTCATTA GTGTGCGTCA ATCACAAGCC AAAGGGTTAG GCCATGCCAT TTTATGTGCA
AAGTCTGTGG TTGGTGATGC GCCTTTTGCC GTTCTTCTTC CCGATGTCCT AGTGGATGAA
GCCAGCTGCG ATCTGCGTAA CGACAATCTT GCAGAGATGG TTAAGCTCTA TGATCAAACT
GAAACTGGCC AGATAATGGT TGAGGGAGTA CCAATAGATC AGGTTGATCA ATACGGCATA
GCCGATGTTA AAGGGCATGA CCTGCAACCG GGTGAATCTG TCCCCCTAGC TCAATTAGTT
GAGAAGCCCA ATATTAATGT CGCCCCTTCC AATCTAGCAG TCGTCGGCCG TTATATTTTA
CCTGCAGATA TTTGGCCACT GCTTGCAAAA ACTCCAGCAG GAGCCGGTGA TGAGATACAG
TTAACCGATG CGATTGCCAT GCTAATGGAA AAACAAACAG TTAACGCCTA CTACATGAAG
GGCAAGAGCC ATGACTGTGG TAATAAACAA GGTTATATGC AAGCCAGTGT AGAACATGCA
CTTCGCCACA AAGAGATCGG TCATGATTTC AAGCAATATC TTAAGCAGTT AGTCAACGAA
TTCGACGAGG AAAAGTAA
 
Protein sequence
MKQHKICKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVNEAINA GINEIVLVTH 
ASKNPIENHF DTSFELEAQL ERRVKRQLLS EIQSICPRGV TVISVRQSQA KGLGHAILCA
KSVVGDAPFA VLLPDVLVDE ASCDLRNDNL AEMVKLYDQT ETGQIMVEGV PIDQVDQYGI
ADVKGHDLQP GESVPLAQLV EKPNINVAPS NLAVVGRYIL PADIWPLLAK TPAGAGDEIQ
LTDAIAMLME KQTVNAYYMK GKSHDCGNKQ GYMQASVEHA LRHKEIGHDF KQYLKQLVNE
FDEEK