| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1709 |
|---|
| Symbol | |
|---|
| ID | 6115950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2126235 |
|---|
| End bp | 2127029 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641633191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760089 |
|---|
| Protein GI | 170726063 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1434] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.221791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.939525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGATA CGATGTTTTG GTTAAAGAAG ATAATTTCTC AGCTGTTTAT GCCTGTGCCC
CTGACAGTGT TGCTCCTGCT TGTTGCGATG GTGCTACTTC GAAATAGGAA ATTAGTTCGT
AGCTTACTTT CCCTTGCTAT TGTATTGCTG GTTTTTCTTA GCAGTACACC AGGTAGTAAT
CTGCTTAGCT CACCACTTGA AAACAAATAT AGTGTTAATA GTAACACCAT CCCTAAAGGG
TGTTTAGTGA TGGTGTTGGG CAGTGGCCAT GATGAGTCAA TCTCTGGTAC AGCAGTTCAA
AAACTCTCTT CAACTGCACT GGCGAGACTG TCTGAAGGTA TTCGTCAATA CAATCTAGGC
AGTGATTGTA AACTGGTTGT CAGTGGCTGG AGTGGAGGGG AGGGGACTCT TTCCCATGCT
GAAGTGATGG CTGAAGCGGC GATAGAGTTA GGAATAGATA ACGAGCGTAT CATCAGGTTT
CCGTTAGCAA GAGATACCAT AGAGGAAGCC GAGTTTCTTA AATGGGAGAT AGGTAATTAC
CCATTTAGAT TGGTCACATC GGCGAGTCAT ATGCCTCGCT CCATGGCTAT TTTTCAAAAT
ATTGGTTTAG CTCCTCAAGC GGCTCCTACG GATTTTATGA CACGTCAAGG ACGTTGGTGG
CGACTTGATG CGGAAAACTT ATGGTCATCT CAAAGAGCCA TTCATGAGTA CCTTGGTCGT
CTGTGGTTTA AAATAAAGTA TGAAAATGAT GGCACAATGA ATAATGCCTC TACACCGGCA
AGAGAGAGTT ATTAG
|
|---|
| Protein sequence | MLDTMFWLKK IISQLFMPVP LTVLLLLVAM VLLRNRKLVR SLLSLAIVLL VFLSSTPGSN
LLSSPLENKY SVNSNTIPKG CLVMVLGSGH DESISGTAVQ KLSSTALARL SEGIRQYNLG
SDCKLVVSGW SGGEGTLSHA EVMAEAAIEL GIDNERIIRF PLARDTIEEA EFLKWEIGNY
PFRLVTSASH MPRSMAIFQN IGLAPQAAPT DFMTRQGRWW RLDAENLWSS QRAIHEYLGR
LWFKIKYEND GTMNNASTPA RESY
|
|---|
| |