Gene Swoo_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1708 
Symbol 
ID6115949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2125291 
End bp2126181 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content47% 
IMG OID641633190 
Productfructokinase 
Protein accessionYP_001760088 
Protein GI170726062 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.485293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.905174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGAA TGGGCGTCGA CCTTGGTGGA ACTAAAATTG AAATTGTAGC GTTAAATGAT 
GGAGGAAAAG AACTTTTTCG TAAACGTATA CCGACTCCAA GAGAGTACCC TGCCACGCTG
GATGCAATAG AAGCACTGGT CAATGAGGTT GAGTCAACAT TGGGAGAAAC TGGAACTGTT
GGCGTGGGGA TCCCTGGTGT TGTTTCTCCC TATTCTGGGC TGGTAAAAAA CGCCAATTCG
ACTTGGATTA ATGGTCACCC TTTAGATGTG GATTTAGGTG AGCGTTTGAA TCGTGAGGTG
AGAGTTGCCA ATGATGCTAA CTGCTTTGCT GTTTCTGAAG CTGTCGATGG CGCCGCTGCA
GGAAAGGGGG TTGTATTTGG TGTGATTATT GGCACTGGCT GTGGTGCCGG CTTTGCGATC
AATGGCAAGG TACATGCAGG TGGTAATGGC ATTGGTGGTG AATGGGGCCA TAATCCGCTG
CCTTGGATGA CAAGTGATGA GTTTAATACT ACCTCCTGTT TCTGTGGCAA TAGAGATTGT
ATTGAGACCT TTATTTCCGG TACTGGTTTT GTCAGGGATT TTAAAGCAGC TGGTGGACAA
GCAAATAGCG GAATAGAGAT CGCGAGTTTA GTGGAAAACG GAGATAAGTT GGCCAAAGCG
GCCTTTGAGC GTTATATCGA TAGATTGGCT CGCTCATTAG CCCACGTGAT CAATGTGCTT
GACCCTGATG TGATTGTGTT AGGCGGAGGT GTGTCTAACA TCGCAGCTAT CTATCCTCTG
TTACCAGAAG TATTACCTAA ATATGTACTT GGCGGTGAAT GCAGAACACC TGTTGTACAA
AATATGTATG GCGGCTCTTC GGGAGTGAGA GGCGCAGCTT GGCTATGGTA A
 
Protein sequence
MVRMGVDLGG TKIEIVALND GGKELFRKRI PTPREYPATL DAIEALVNEV ESTLGETGTV 
GVGIPGVVSP YSGLVKNANS TWINGHPLDV DLGERLNREV RVANDANCFA VSEAVDGAAA
GKGVVFGVII GTGCGAGFAI NGKVHAGGNG IGGEWGHNPL PWMTSDEFNT TSCFCGNRDC
IETFISGTGF VRDFKAAGGQ ANSGIEIASL VENGDKLAKA AFERYIDRLA RSLAHVINVL
DPDVIVLGGG VSNIAAIYPL LPEVLPKYVL GGECRTPVVQ NMYGGSSGVR GAAWLW