| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1704 |
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| Symbol | |
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| ID | 6115945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2117371 |
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| End bp | 2120877 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633186 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001760084 |
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| Protein GI | 170726058 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTA GGTTAAAGAC GGTGCTTGGA ATTGCCTTTA TTGAGGGAGT ATTGCTCCTG
CTACTGGTGT ATACCAGTGT TGATTACCTA AAGAGCTCTA ATGAAGCCGA GATAGTTAAG
CGAGCTGATG CCATAGTGAC GCTGTTTGCT GCTGCGACTA AAGATGCTGT AATAAGTACC
GATCTGTCCA CATTGCAAGT GCTTGCCAAT GAACTCTTGG AGAGTAATCA AGTTTTATAC
GTCAATATCT ATGATAGAAA CTCGCTTTTA GTTCAGGTCG GTGAAATCTC ATCTGGAGAA
GTTGGCTTCG AGGTGGAAGA TGAGGAGAAC CCTCCGGGGA GGATCGTTGG ACTGAGCAAT
GGAGTGTTAG CTGTTCAGGC AGAGATTTTA GAGTCAGGCT ATCATTTCGG TCATGTTGAA
CTGGGCATTA GTGTACATAA GTTCGATCAG TTTCTAATCG ATGCTACAAC ACGTTTTTTC
TCTATTGCAG GGCTAGAGAT GGTGTTGGTT GCTCTGTTTT CTTGGCTTTT AGGCCATTAC
CTGACAAGTA ACTTAAGTGA GCTGAAAACA GCCTCAAATC GAATTTTACA AGGTGAAACC
GGAATACAAA TTCCAGTGAC TAGCAGTGAT GAGATAGGAC AGACCACGCG CGCTTTTAAC
CGAATGATTG AGAAGGTGGA GGGAAAAGCA AAGGAGTTAG AGGGAGCGAA TACTCGTTTA
AATACCATTC TGTCTGCTGC TGTCGACGGC TTTATTATTA TCGATGTTTA TGGTGTCATT
ACTCAGGTTA ATCCTGCGAT ATGCCGGCTT TTTGGCTATA TGGAGGATGA GATTGTCGGT
AAAAATGTTT CTATTTTTAT GCCGAGTTAT GAGCGACATA CACATAATGC TTTTTTGAAA
CGTTTTATTG AGGGGAAGCG GGAGGCTGTT GAGCGAAATG GAAGAGAGTT CATGGCGCTA
CATAAAGATG GCAACCTTTT TCCTATCGAA CTCTCTATTT CTAAGATGAC CATAGAAAAG
GAGATCATGC TGTTAGGCTT GGTCAAAGAT CTCAGTGATA TCAAACAAAA AGAGATCGAG
GCTAAGCGAA CCGAGTCGAT TTTATTAGCG ACCCTCGAAG CGAGTCAAGA TGCACTGATA
ACAATTGATA TTGCCGGTAA AATTCAAGAG TTTAATGAAG CCGCCAGTCA GCTATTTGGA
CATGACAAAG AGAGTGTGAT TGGTGAGCAA CTTGCTGAAG TTATCTTTAC TGATATTGAG
AAGGCCTGTT TTAAGGAAGG TTTAGAAGAG TTCAGGCAAA CGGGAGATGG ACCAGCCATT
AAAAAAAGTA TTGAATTAAT GTCGATGAAA CTTGATGGCA GTACGCTGCC AATTGAGCTG
AAGATGATAC CTGTTCAGCT TGGGGATGAT ATATTTCTTA CCGCTTTTAT CCATGATATC
TCCAAACGCA TGGAATATGA GTTGCAGTTA AAGAATGCGA AAGAGGAGGC TGAGTCTGGT
AGTAAGGCAA AATCTCGTTT TCTTGCCACA ATGAGTCATG AGATCCGCTC TCCATTAAAT
GCAGTGTTAG GCAGTGTAGA ACTCTTGTTA GATTCGATGT TGAATAAGGA GCAGAGACTT
TATGCGCAGA CCGCCAGAGA AGCTGGTACG GCGCTACTGA GTACCATCAA TGATATCTTG
GATTTCTCTA AAATCGAAGC GGGTCAAATG GCTTTGGAAA CCGAGAGTTT TTCTCCTGCT
AAGTTAGTGT CCCAAGTGAT GCAGATTTTA GCGCCTAAAG CGGCGGAAAA AGGGGTAAAC
CTTGCCACAT TTATCAATCG AAATGTGCCA GAGATAGTAA AAGGTGATGC TCAAAGGTTA
AGGCAAGTGC TGCATAACTT GGTGGATAAT GCGATTAAGT TTTCTGACTC AGGGTGCATC
TCTGTTGAGA TGTGGATCCC CGATAGTCAT CATCAGGAGG TGCAGCTTTA TTGTACGGTG
ACCGATGAGG GCATTGGGGT GAGCCTTTCA GCTCAAGAGA AGTTATTTCA AGAGTTTAGC
CAAGTTCACG ATCAACATAA TACGAGTTAT AAAGGAACGG GATTAGGCTT AGCTATTTGC
TCCGAATTGA TCACCATGAT GGGAGGTAAA ATTGAGCTTA GTAGTCGGTT AGGCCACGGT
AGCTGCTTTC GGTTTGATGT TCGATTACAG CAAGACCCAT GTGAGTTGAA TCATTTCTAC
CATCTTCCCC AACACGCCAG AGTGCTGTTG ATCCACTCAG ATAAAACGGT GGTCGAGCTA
GCTCGTAAGC AGTACTGCCA ATATGGTGTG CACTGTGACA ATCTGGACAA TATTTCAATT
CTAGTTGGAA GTGCTGAGGT GAAAGGACGT TTTAATTTAA TTTTGATTGA TGAAACAAGC
CTGCCTGAGA TAGATCAGAG TTTGACTTAT TTACTAAAGC GCGACTTTTT ATTTGAGGAG
GGGATACTCG CTTTACTGGT GTCTAGCTTA GGTTCAAATA TGTCTGAGGA GCTATCTAAA
CTTGGCTTAG AGCAGGTGAT ATATAAGCCA TTAAATAGAG ATATTTTACT TGGTTTATTA
AGTAAGAGTT ATCTAAATAA AAAAGAGAGT AGTGCAGATA TCCTATTACC CGATATAACA
CCTAAAAATA AGTTGTTGTT ATTAGCTGAA GACAGTATGT CAAACCAACT TGTGGCAGGC
GCTATGCTGA CTAAGGCAGG CTATGAAGTT GAGTTTGCAA ATAATGGTGT TGAAGCGGTT
AGCATGGCAG CGGAAAAAAA CTATGGCTTG ATTTTGATGG ATATGCGTAT GCCGGAGATG
GATGGTGTTG AGGCTGCGCA ACTTATTTTA CTGAGCCAAC CAGACACCAT TATTCTTGCT
ATGACAGCTA ATGTTCAACA GGAGGATATG GATAGTTGTT TAAGGGTAGG TATGAAGGAT
TTTGTCCCTA AGCCTGTCAA TAAAAATGAT TTAATTAGGC TCATTGAACA GTGGTTGCCC
GCAATCACAG ATGAAGAGCG GGTGATTGAT TCTGTAGACA GTGAAGTGAG AGTTAATGAG
CTAAAAAGTT GTGAACATCC AGATGAGGAC ATAAGCTTTA AGGATGACAG AGCAGAGGTT
ATCCCCCTTA TGGCTGAGAT GGAAAGTGAA GCTGAAAAGT TAAAAGATAA CTTGTTTGAT
GAAGGAGTTA TCTCTGAGCT GTTTGATGTA CTTGGCCAAG AGTCTGTAGA GGGTATGTAC
TCAGTTTATC TTTCTGAAAC AGTTGAACGT TTAGAGGTGT TAAAAACCTT AATGAAAAAC
CGAAATTATC ATGAGATAGA CAATCAAGCC CATACGTTAA AAAGTAGCTC AGGTAGTTTT
GGTGCCCAAG CTCTCTACAA GGTTGCAAAA AACCTAGAAA AAAGTGCGAG AGAGAAAGAT
GAGAACAATA TAGAGTTTCA TTTTTTAGCT GTCCAACAAG TTGGTGATGA AACGGTAAAG
GCTTTTAAAG ACAGATTTAT CGCTTAA
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| Protein sequence | MSFRLKTVLG IAFIEGVLLL LLVYTSVDYL KSSNEAEIVK RADAIVTLFA AATKDAVIST
DLSTLQVLAN ELLESNQVLY VNIYDRNSLL VQVGEISSGE VGFEVEDEEN PPGRIVGLSN
GVLAVQAEIL ESGYHFGHVE LGISVHKFDQ FLIDATTRFF SIAGLEMVLV ALFSWLLGHY
LTSNLSELKT ASNRILQGET GIQIPVTSSD EIGQTTRAFN RMIEKVEGKA KELEGANTRL
NTILSAAVDG FIIIDVYGVI TQVNPAICRL FGYMEDEIVG KNVSIFMPSY ERHTHNAFLK
RFIEGKREAV ERNGREFMAL HKDGNLFPIE LSISKMTIEK EIMLLGLVKD LSDIKQKEIE
AKRTESILLA TLEASQDALI TIDIAGKIQE FNEAASQLFG HDKESVIGEQ LAEVIFTDIE
KACFKEGLEE FRQTGDGPAI KKSIELMSMK LDGSTLPIEL KMIPVQLGDD IFLTAFIHDI
SKRMEYELQL KNAKEEAESG SKAKSRFLAT MSHEIRSPLN AVLGSVELLL DSMLNKEQRL
YAQTAREAGT ALLSTINDIL DFSKIEAGQM ALETESFSPA KLVSQVMQIL APKAAEKGVN
LATFINRNVP EIVKGDAQRL RQVLHNLVDN AIKFSDSGCI SVEMWIPDSH HQEVQLYCTV
TDEGIGVSLS AQEKLFQEFS QVHDQHNTSY KGTGLGLAIC SELITMMGGK IELSSRLGHG
SCFRFDVRLQ QDPCELNHFY HLPQHARVLL IHSDKTVVEL ARKQYCQYGV HCDNLDNISI
LVGSAEVKGR FNLILIDETS LPEIDQSLTY LLKRDFLFEE GILALLVSSL GSNMSEELSK
LGLEQVIYKP LNRDILLGLL SKSYLNKKES SADILLPDIT PKNKLLLLAE DSMSNQLVAG
AMLTKAGYEV EFANNGVEAV SMAAEKNYGL ILMDMRMPEM DGVEAAQLIL LSQPDTIILA
MTANVQQEDM DSCLRVGMKD FVPKPVNKND LIRLIEQWLP AITDEERVID SVDSEVRVNE
LKSCEHPDED ISFKDDRAEV IPLMAEMESE AEKLKDNLFD EGVISELFDV LGQESVEGMY
SVYLSETVER LEVLKTLMKN RNYHEIDNQA HTLKSSSGSF GAQALYKVAK NLEKSAREKD
ENNIEFHFLA VQQVGDETVK AFKDRFIA
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