Gene Swoo_1692 details

Gene Information

• Locus tag: Swoo_1692
• ID: 6115933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella woodyi ATCC 51908
• Kingdom: Bacteria
• Replicon accession: NC_010506
• Strand: -
• Start bp: 2102196
• End bp: 2102597
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641633174
• Product: glycerol-3-phosphate cytidylyltransferase
• Protein accession: YP_001760072
• Protein GI: 170726046
• COG category: [I] Lipid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0615] Cytidylyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain; [TIGR01518] glycerol-3-phosphate cytidylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAACGA TAATTACCTA TGGCACTTTC GATCTCTTTC ATTTCGGCCA TGTACGTCTT 
TTCCAGCGAC TCAAGGCCAT GGGGGACAGG CTCATCGTTT GCGTCTCTAC GGATGAGTTT 
AATGCCAAAA AAGGCAAGGT CGCTTTTTTC AATTACCAGC AAAGAGCGGA GATCATCGCA 
GCGTGCCGTT ATGTGGATTT AGTGCTACCA GAAACAAACT GGGAACAAAA AAGAGAAGAT 
ATAGAAAAAC TTGATATTGA CATCTTTGGC ATGGGAAGTG ATTGGCAGGG TAAGTTTGAC 
GACCTGTCCA ATCAATGCAA AGTCGTTTAT CTAGATAGAA CGGGCAATAT TTCAACCACA 
GAGATAAAGA GCAGCTTAGG GGCTAACCAG GGGCGTTCGT AG 

 

Protein sequence

MKTIITYGTF DLFHFGHVRL FQRLKAMGDR LIVCVSTDEF NAKKGKVAFF NYQQRAEIIA 
ACRYVDLVLP ETNWEQKRED IEKLDIDIFG MGSDWQGKFD DLSNQCKVVY LDRTGNISTT 
EIKSSLGANQ GRS