Gene Swoo_1691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1691 
Symbol 
ID6115932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2100811 
End bp2102109 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content40% 
IMG OID641633173 
ProductCDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 
Protein accessionYP_001760071 
Protein GI170726045 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTT TCACCGCAAT AATAAGAAAG ATCATCTATC ACACAGCAGG TTTGTGTCCT 
AGGGTCAATA AGGCCGTATT AGGTAGCTAT AAAAACCAGT TTTCAGATAA CGCCAAGTAT
CTTTATCTTC ATTGGCAGCA CACTGGATTA ATACGCTCCA TTTGGATTAG TGGCGATAAT
GCGGTAATTA AACGCTTACG AAAAGAGGGA TTTGAAGCAT ATAACAGACG CAGCATTTTA
GGCATATTTC ACTGTTTAAC CGCTAAGTTC TACTTTTACA ATAGTTACGT AGGCGATATT
AATCAGTATT TTGCTAAAGG TGCGGTCAAG GTAAACCTAT GGCATGGCTC ACCGCTTAAA
AAAATTGAGT TCGACATCAC TTCAGGCCCA TTGGCTCATA CTTACCAATC CGATACCCTT
ATAGGTGATT GGAAAAATAG ATTACATTTC CACCAGCAAC ATATTAAACC CGATATGATG
CTCAGTCCCA GCCCAGTGAT AGATAGTCTA TTTTCCTCGG CTTTCAGGCT CGCGCCCCAT
CAACTCATTC GCAGTGGTAA CCCTAGAACC GATTACTTCA AACGTTACCC AGAACAAACA
AAGTCGATAC CAGAACTACT TAATACCCAA TATAAAAAGG TCATTTTATA TGTACCAACA
TGGCGAGACA GTGGCATTAA CAATAAAAGC GATGGGCAAA ATGGAGCCAT AGAGAACCCA
TATGATAAAG GGTTTAACTG GGCTGCACTA TCAAAACAGC TAAAGCGTAA CAAGCAGCTA
TTTTTAGTCC GGTTTCATCC TAATGAAGCT CATTTGGGAA AAGATCTAAA TCAATACTCA
AACATTATCG ATATTTCACA CTGGGAAGAT GTTTACAATA TTCTTCAAGG CGTTGATCTG
CTTATCACCG ACCAATCCTC CCTGTTCATC GATCTGTTAC TCCATCAAGT CCCCATTCTA
TTTTACTCAT TCGAGCAAGG TGGGAAACCT GAAAAACTCA GGGAGATATA TGATTACGCA
GAGTACTTAC CCTTAGTTGG GCAAGTAACT AGCAATGAAG CCATTAATAA CAGATATCGG
GTTTATCAGT TCCAAGCATT AATGGAGCGG TTAGACCGAG ATGAAACCTT TCATATCTCC
CCCTCAACCA TTAATGAATA CCAATTACTG CGAAATATCT TCTGGCAACA ACAAAAGTGT
GATGCATTCG AAAACATCGA GCGCTGCCTG TTCTCCAATG AGAAACAGAA CAAAATAAAG
GGGACAGAGA AAAGTGGGCT ACGCCCAGCT AGATTCTAG
 
Protein sequence
MTFFTAIIRK IIYHTAGLCP RVNKAVLGSY KNQFSDNAKY LYLHWQHTGL IRSIWISGDN 
AVIKRLRKEG FEAYNRRSIL GIFHCLTAKF YFYNSYVGDI NQYFAKGAVK VNLWHGSPLK
KIEFDITSGP LAHTYQSDTL IGDWKNRLHF HQQHIKPDMM LSPSPVIDSL FSSAFRLAPH
QLIRSGNPRT DYFKRYPEQT KSIPELLNTQ YKKVILYVPT WRDSGINNKS DGQNGAIENP
YDKGFNWAAL SKQLKRNKQL FLVRFHPNEA HLGKDLNQYS NIIDISHWED VYNILQGVDL
LITDQSSLFI DLLLHQVPIL FYSFEQGGKP EKLREIYDYA EYLPLVGQVT SNEAINNRYR
VYQFQALMER LDRDETFHIS PSTINEYQLL RNIFWQQQKC DAFENIERCL FSNEKQNKIK
GTEKSGLRPA RF