| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1688 |
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| Symbol | |
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| ID | 6115929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2096849 |
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| End bp | 2098576 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633170 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001760068 |
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| Protein GI | 170726042 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTAG ATGCTTATTT GACGATAGGG GTGTTCTGCA TGACGATTTT GGGGCTTATT
AGCTTCCAGA GTCGTCCATC TCTGGTATTT GGTGTAGCTC TACTTGTCTT AGTGGGGCTA
AATCTTGTAT CGCGTGAGCA GCTTCTGTCG AGTATGTCTA ATCCTGGATT AGTGACCTTA
GTGCTATTAA TCCTATGCTC GTTTGCCCTT GAGAAAACCC GTTTACTGCG GGTGATAGCC
TCTAAGGTGA TAGTGGGCAG TTACAACTCA ACTTGGGCGC GCCTATTTGG CGTGACGGCA
CTTAGTTCTG CCCTATTAAA TAATACGGCT GTGGTAGCCA CTTTGCTCTC TCCAATTCGT
AATAATCCAC ACCATTTTGC CAGTAAATTA CTCTTGCCTC TCTCCTATGC CGCAATTTTG
GGGGGAACGC TGACACTGAT TGGTACGTCA ACCAACCTGA TTATTAATAG TCTCTACATC
GATGCAGAGG GAAAGTCATT GAGCTTTTTC TCCTTTACCG CTGTCGGTGC CATGTTGGTG
TTGGCGTGTG GATTGGTGTT AAGAGTCGTT TCTCGCTGGT TACCTGAGAT TGAACATAAA
GAGTCTTGCT CAAAAGGTTA CTTTATCGAT GCTGAAGTGG TTGAGGGGTC TGAGTTAATT
GGCCGCTCGG TTGAAAATAA TGGATTAAGG CATCTTGAGT CTCTGTTTCT TGTTGAAGTT
GTGCGCAATA AACGTCTGAT TAGTCCAGTT ACACCGACCG AGGTGCTGCA ACTTGGTGAC
AGGCTTATTT TCAGTGGCGA TATCACGAAA ATGATGCAGC TTAGTCAGTT TTCTGGGTTG
GAGATGTTTG CCGAGAAAAA TGGTCTGCTG GATTCTAACC TGACCGAAGT TGTGGTTAAG
CAAGAAAGTG TGCTTATCTC AAAAACCTTA AAAGATGCAG GTTTTAGAGC GCTTTTTGAT
GCAGCTGTGG TTGCTATCAG GCGTGATGGC GAGGAGATAT CGGGTAAGTT AGGTGAAGTG
GTGATAAAGG CTGGCGACTT TTTAATTTTA GCCGTGGGGG ATGACTTTAA ATCACGACGA
AATCTCAGTA AAAACTTCAT TGTGATCAGT GGTGTTGAGC CCGAAACACG CAATAATGGC
CTGAAAGCTT GGCTCTCTAT TGGTGGCTTT GTTCTCACTA TTGGATTAGC GGCAACCGGA
GTGATTGAGA TGCTCCAAGG GTTAATGTTA CTCCTAGGAG TATTGATTTT TAGTCAGTGT
CTTAGCGTTA ATGAAGTCGT TAGGCGTTTC CCTGTGGATA TCTGGCTTAT TGTTTCCACC
GCCATTTTGC TTTCTCACGC CTTAGTGAAT ACTGGTGTGG TTGAGCTGTT ATCTCAGTGG
GTCAATCAAG TGGCCGATAA AGAGCATTTG TTTATGGCTC TAGTTTTGGT GTACCTTGCC
ACTTGGCTTA TCACTGAGCT TGTGACCAAT AATGCGGCAG CTGCTTTGAT GTTTCCAGTT
GCTTACAGTA TTGCCTTAGG GTTTGGCGTG GATATATTGC CGTTTATCAT GACGGTTGCG
TTTGCGGCGA GTGGCAGTTT TATCAGTCCT TATGGGTATC AGACAAACTT GATGGTGTAT
AACGCAGGCC AGTATAAGCT GATGGATTTT GTCAAAATCG GTTTACCTGT CAGTCTGGTT
TATGCGGCTA TTGTGTTAAC TGCTGTGCCG ATCTTTTTTC CGTTTTAG
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| Protein sequence | MSLDAYLTIG VFCMTILGLI SFQSRPSLVF GVALLVLVGL NLVSREQLLS SMSNPGLVTL
VLLILCSFAL EKTRLLRVIA SKVIVGSYNS TWARLFGVTA LSSALLNNTA VVATLLSPIR
NNPHHFASKL LLPLSYAAIL GGTLTLIGTS TNLIINSLYI DAEGKSLSFF SFTAVGAMLV
LACGLVLRVV SRWLPEIEHK ESCSKGYFID AEVVEGSELI GRSVENNGLR HLESLFLVEV
VRNKRLISPV TPTEVLQLGD RLIFSGDITK MMQLSQFSGL EMFAEKNGLL DSNLTEVVVK
QESVLISKTL KDAGFRALFD AAVVAIRRDG EEISGKLGEV VIKAGDFLIL AVGDDFKSRR
NLSKNFIVIS GVEPETRNNG LKAWLSIGGF VLTIGLAATG VIEMLQGLML LLGVLIFSQC
LSVNEVVRRF PVDIWLIVST AILLSHALVN TGVVELLSQW VNQVADKEHL FMALVLVYLA
TWLITELVTN NAAAALMFPV AYSIALGFGV DILPFIMTVA FAASGSFISP YGYQTNLMVY
NAGQYKLMDF VKIGLPVSLV YAAIVLTAVP IFFPF
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