Gene Swoo_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1685 
Symbol 
ID6115926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2093277 
End bp2093726 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content36% 
IMG OID641633167 
Producthypothetical protein 
Protein accessionYP_001760065 
Protein GI170726039 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.365398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGA ATGACTTGCG TAAAGGTCGG TTTTCACAAG AGCAAGGTGA ATATTTTATT 
ACTTTCAACA CACAGAACAA GCAAACATAT TTCAATGATT TCCGCATTGC ATCCATATTC
TGCTCGCAAA TAGCAATGAG TGAACATCAG CATAATTGCA TATGGCTAAC TTGGGTGTTG
ATGCCAGATC ACTTCCATGG ACTATTACAT TTGGGTAATG ATTCAGAATT ATCAAAGATT
GTAGGGACAC TTAAAGGAGC CAGCAGTTTT GCTATCAATA AAGAGTTAAA ATCAAGCTGC
AAGCTGTGGC AATCATCATT TTATGACCGA GCTTTACGTT ATGATGACGA CAGAAAAAGC
ATTAGCCGAT ACATAGTGGC TAACCCATTA AGAAAAAATC TAGTCAAAAA TATAGGAAAT
TACCCATATT GGAATTCTGT TTACTTGTAG
 
Protein sequence
MSWNDLRKGR FSQEQGEYFI TFNTQNKQTY FNDFRIASIF CSQIAMSEHQ HNCIWLTWVL 
MPDHFHGLLH LGNDSELSKI VGTLKGASSF AINKELKSSC KLWQSSFYDR ALRYDDDRKS
ISRYIVANPL RKNLVKNIGN YPYWNSVYL