| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1682 |
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| Symbol | |
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| ID | 6115923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2090431 |
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| End bp | 2090979 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633164 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001760062 |
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| Protein GI | 170726036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.298801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTTA TATCCACACC AATCAGCGAT GTAAAGATAT TAGCTCCGCA AGTATTTACT
GATGAGCGAG GCTCTTTTCA TGAAATCTTT CGTGATGATT GGTTTATAGA GCATGTTGCT
GATGTTCGCT TTGTTCAAGA AAATCAGAGC TCGTCTAAAC AGAGTACGTT ACGCGGCTTG
CATTATCAGA CTGCGCAGAC GCAGGGGAAA CTAATCCGCG TTATCTCTGG TGAGGTGTTT
GATGTAGTGG TTGATTTGAG GCGTTCAAGT CCAACTTTTG GTCACTGTTT TTCGACAACT
CTTTCAGCTA ATAACAAACA TCAACTTTGG GTGCCAATTG GATTTGCTCA CGGGTTTTAT
GTAACTTCTG AGTCCGCAGA GTTAGTATAT AAGTGCACCG ATTATTATGC GCCACAATTT
GAATGTTCCA TACTATGGAA TGATCCTGAA CTAGCGATTG ATTGGCCAAT CGCTAGTGAC
TGTAATCCGC TGCTTTCTGA AAAAGATAGA AAGGGAGTAT TGTTCCAAGA TGCTTTTGTT
TTTGAGTGA
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| Protein sequence | MKVISTPISD VKILAPQVFT DERGSFHEIF RDDWFIEHVA DVRFVQENQS SSKQSTLRGL
HYQTAQTQGK LIRVISGEVF DVVVDLRRSS PTFGHCFSTT LSANNKHQLW VPIGFAHGFY
VTSESAELVY KCTDYYAPQF ECSILWNDPE LAIDWPIASD CNPLLSEKDR KGVLFQDAFV
FE
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