| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1677 |
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| Symbol | |
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| ID | 6115918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2074124 |
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| End bp | 2080825 |
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| Gene Length | 6702 bp |
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| Protein Length | 2233 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633159 |
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| Product | hypothetical protein |
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| Protein accession | YP_001760057 |
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| Protein GI | 170726031 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA CCTTCAATAA GTTGAAGTCT CTTTTGGATT GTTCAGCTTT AGTTTTTTGT
ATGGGAGCCA CTTTCTTTGG AAGCCAAACT TTCGCGGCGG GTACTGACTT AACTTTGTCT
GGGAGTTTTA GCTCGCCTAC CATTGCTTCT GGTCATATTA GTACTTTGAC CTACACGTTA
ACTAATACCT CGGGAGCTTC TGCAAGTGAT ATTGGATTTA CAGCCACATT ACCCTCTGGT
CATTTGATTG CTGAGCAAAC TCAAGCATTT TCGAATTGCT CTGATGGTAC ATTTGCCGCT
GTTGGAGGTG ACAGTATTTC TACTGCATCA GGTTACCGAC TTGGAGCTGG TCAAAGTTGT
TCATTCATGT TTAATGTCAC TGCTACTGTT AATGGCGCTG CTGCAACTTT AGTAACAGGT
CTAACTTCTA GCTTAGGTGC TGGAAGTGAT ATTTCAACAA CGTTGACGGT TGATGACACT
CTGTTTACTG CATCGGCTAG TTTTAGCTCT TCTGTGGTGA ATTTAGGTGC TATCAATCGC
CTCTCACTCT CTTTTTCAAA TTTAGGGGGA ACGGTCACAA ACGGGACGAC CAGTGTCGAT
CTTCCAAGTG GTTTAGAGAT CGCTCCCATA GCCAATTTTA GCTCTGACTG CTCACTTGCC
TCACTTAATG AACCTTCTGG AAGTAGTACT GTTACCATTA ACGGGATCTG GTTGAATTCC
GAAGCAACAT GTACAGCTGA AGTCGATCTG ATTGCAAATA GCGCAGGTAT GATGGATCTG
GTTTGGGATG ATATGTTTGG TACAGTGTCA TTTGCCCAAG TTTTTTCAGG TAAACTAGGC
ACATCCTTTG AGGTCCAAAG ACCATTTGCG AATATTAACT TTAATCCTAT AACCATCATT
CCTGGAGCCA GTGGCAGTCT GGATGTTACT TTGACTAATT TTGATCGCAG TAGCAGTGCA
ACTGATATTA CTTTTTCCTC AGATTTAGAT TCTGCTCTCT CTGGGCTTAT TGCGACAGGC
GGTACCCAAG TTGATGTATG TGGTGCTGGT TCCTCAGTTA CTGTCGGTAG CTCCATCAAT
TTTAGTGGCG GCTCTGTATC GAGTGCATCA AGCTGTAGTT TTTCTATCCC AATACTTGTC
CCTAATGGCG CGGCTCAAGG CGCATATACA TTAACCACAA CTGCAATATC AGCGTCACTT
AATGGTGGCA CAACGAATTA TAGTGATACA AGTAATGCCT TGATTGTATC AAATACTCCA
GGCTTAACGA TTACGGTACT AGAGAGTGGG GTAACATCTG GTGACGATGT TACTCTGCGT
CATACTGTGA CAAATATAGA CAATACGTAT ACAGCAACAG GGATTGAGTT TGAGACTGAT
TTTGTTAATT TAACAGGCGC TGTGATTAAA ACATTACCAG CCACAAATGA TTGTGGTTCT
GGTTCGGCTT TTTCTTCTGT GTACAAGTTT GATGCTTTTA CTGCCATGTC TATGACTGCT
GGTGAGCTTG CTCCAGGAGC GAGTTGTACA TTTGATTTAG TGCTGACTCT ACCTTCAGGT
ATCACAGCTG GTGAATACAA CGTTTCTGCT GGTGCAATCT CTGCAACTAT TAATAGTCAG
GCTGTTGAGT CTGGTACTCC CTCTGCAAGT GAAACTTTTA TTGTTGATAC TGCACCGTCA
TTAGTTTTCA CTTTTAATGA TGAGAGTTTA CTTCCTGGTA GTAGTACTAG TATTGATTTT
TCTCTTAGCC ATGCTTTTGC ATCATCTGCG GATGCGACAG GAGTCAGTTT TACCCTTGAT
CTAGACGGAG TACTGAGTGG TTTAGTGGCA TCAAATCTGC CTTCCGAGCC TTGTGGGGCT
GGTTCTACTC TCACTGGTTC AGGACTTCTT ACCTTCGCAG GAGGTTCGTT ATCCCCATCT
AGTTCATGCG ACTTTTCTGT TGATGTAACG CTTCCTGCTA GCACAGTGGG AGGTTACACA
TTCACGAGTT CTGTTGTAAG CGCGACCGTA TCTGGAAATG CTGTCACATC TCAGATAAAT
AGTGCTGATA TCACCATTAG CGGGCTAAAT TTTAGTAAAG CATTTGCGAC AAACCCTATA
CGAGTTGGCG CAACAGGTAC TGAAGTTGAT ATTAACTATT TAATTACCAA TGAAGCGGGA
GCTGATGATG CGACAGTGAT TCAGTTTACT GATAGCTACA ATGCAATGGT CGCAGGTACA
ACAATTACCT CTGCCGATCA AAGTGCATTT TGTGGGGCAA GCTCAGCAAC GAGTGGATCA
GGTGGGAGTT TTTTAGTCGT CAGTAATGTT GAGGTTGCAA ATGGTGAGCA GTGTATCCTG
ACTGTAACCA TTAACTTGCC AAACTCAGCT ACATCCGGCT CATATGGTGC TAACACAAGC
GGCTTATCAG CAACTGTGGG TGGTAATAAT GTTGCGGTTA GCCCTGCGGT AGCAAGTTTA
GTTATTAATG AGCTTTCTGT TGTAACTAGT GTAGATGTAT CAAGCCCTAC ATCTGAATCG
ACTATTAATT ATGCCATTGA GTTTTCTAAT GCAGTTAATG GCTTTGATGT GACTGATATC
AATGCTGTTA ATGCAACACT GGCTAATTTT TCAGGTAGTG GAACAAATTA TAGTGTTGAA
GTCACACCAA TAGCTGACGG TGAAGTGATA CTCCAGATTG CTTCTGGTGT CGCTGTTGAT
GCTAATGATG CAACAGTGCC TAATCAAGCT GCAATTGATA TTAGTTTTGA CTATCAATCT
ACACCCTTAG TTCCAACTCC TAGTTTGAGC ATAAGTGCGC CATCTGCAGT GCTTGCTAAT
AGTGGCCCAG TGACTTATAC GGTAAGTTAT CTTGATGTTG AGCAGGTTAA TCTGACTGCT
AGTGATATTA CACTGAATAA AACGGGTAGC GCGAATGCTG ATGTTACTAT CATCAACGGT
GATATGAGCA CAGCTACTGT GAGCTTAGAT AACTTAAGTG GCGAGGGTTC CTTAGGGATA
ACAATTGCTG AAGGAAGTGC GAGGTTTAGC ACTAATATAG CGCCAGCTGC CGGCCCTAGT
AATATTGTCG TTGTAGATGC TGTGGCGCCT AATGTTGTTA TAACCGGACC GAATGGTAAT
CAAACTTCGT CTTTTGTCGT CAATATTGAT TTTGATGAGA ATATGTCAGG GTTTACGGTT
GATGACATTG TTGCTTCAAA CGGAACACTT TCAGATTTTC AAACGATTAA TGCTGCAAGT
TACACTGTTC AAGTTGACGT AACTGGGGAG ACTAGTGTTT CAATTGATAT TGCTGCAGGT
GTCGCAACTG ATAGTGCTGG CAATGGTAAT ACTCAGTCAA ATAGTTTCAA TGTTAGTTAT
GACGATGTAC AACCATCAGT CACAATTGGT GGACCATCAG GAACCACAGC AACAGCATTT
ACTGCCACGA TAAGTTTTAG CGAACATGTT TCAGGTTTCG ATGTTGGGGA TATCACAGTC
AGTAATGCGG GCTTGAGTAA CTTTGTCACT ATTGATGCAG CAAATTACTC TGTGCTTGTT
ACGCCAGTGG TTCAAGCGAA TGTTAGTCTA GACATTGCTA ATAGTGTTGC TAATGATCTG
TCTGGTAATG CTAACTTGGC TGCGTCAAAC TTTTCGCTTA CATATGACTT TAATGATGCG
CCCATTATTT CTGGGGCGCC AGTAACAAGC GTTAATGAAG ATTCAAGTTA TAGCTTTTCT
CCCACATTTA GCGATGCTGA TGTCGGGGAC ACGTTGACCT TTAGTATCGT CAATAAACCG
AGTTGGGCAA CATTCAGTAG TGTCAATGGT ACGCTTGCTG GTACACCAAC TAATGATGAC
GTTGGCTCGA CTTCAGATAT TGTTATCTCT GTCTCGGATG GGGCTCTATC TGCATCATTG
GCTGCATTTA ATCTTGAGGT TATCAATACT AATGATGCAC CTCTGATTCT AGGTACACCT
ACAACATCGG TCAATGAAGA TGCTAGCTTC AGCTTTACGC CTACTGCATC AGATGTGGAT
ACGGGTGACA GCTTAAGTTT TAGCATTGTT AATAAGCCAA GCTGGGCAAC CTTTAGCGCA
ACAGATGGTA CACTTGCGGG CACTCCAACG AATGATGATG TCGGCTCAAC TTCAGATATT
GTTATCTCTG TCTCGGATGG GGCTCTATCT GCATCATTGG CTGCATTTAA TCTTGAAGTG
ATTAATACGA ACGATGCTCC TACCGTATCC GGTATTCCAG CAGCTTCAGT GGATGAAGAT
GTAAGTTATA GCTTTACTCC AACTGTTGTG GATGTGGATT CGGGTGATAG TTTAAGTTTT
AGTATTGTTA ATCAGCCAAG CTGGGCAATC TTTAGCTCAA CAGACGGTAC GCTTGCGGGT
ACCCCAACGA ATGATGATGT TGGCTCGACT TCAGATATTG TTATCTCTGT TTCAGATGGA
GCTCTATCCG CATCATTGAC TGCATTTAAT CTTGAAGTGA TTAATACCAA TGATGCTCCT
GTATTTGAAT CTTCTCCTGT ACTAGAAGTA CCTGCTGGAG GCTTATATTC ATACCCACTC
TCTGCCTCTG ATATTGACCC AACATATCAC ATTAGCTTTG AGCTAATGAG TGGACCTGAG
TGGTTGAGTA TAAATAGTGA ATTTACTCTC GAGGGGATAG CTCCTGAAGA GAGTGCTGGT
GAACAGTTCA ATATCGTTGT TGCTCTTAGT GATGGTGATG TTGAATCTCC GGTATTGCAA
GAGTATCTGC TAACTATTGT TGAGCCTTCT GTTACTGAGC TTTCTTCACG ATTCTATTTC
ACTCCTGCGC CAGCGACGGC TCAGCAAGAG GTGAGCTTAG TGTTGGAGAT AACTAACTCA
GGGTTAACTG CAGCTGAGGA TGTTATTTTT GAGATAGCTA TTAGTGATGA GCTCAGTATC
AATACCATCC CAGCTGCTTG TTCTGAGAGC GAGTCGAATA AGCTGGCCTG TCAACTTGAT
ATCGAGATTG AGGCTGGTGG GGCTACTACA ACTTTAGTTG CCCTATCAGT TGGGGAGGTT
GAATCTGGGT TTACCTCTGC CGATGTGTCT ATCTCTGGAG CAAATTTAGG CGGAGTTGTT
ATTGAAGAGA GTGCGCAACT GCTACTGGCT AATGTATTGT CGGTGCTTCC TGGGGACTCA
GTGATTAGTA CGCCTTCAAG TGTTGGCTTT ACTGTTGATA TTAATGGTGA CAGCTTTGTC
GATTTGTTGA GTTTTGATGC CATGGCTATG AAAACATCGA TTCTGACAAA TGATGGCAAC
GGTCAGTTGG TTATATCGTC GAGTTTAGAC ATGATTCAAG ATGTGAAATC TATGCTTGTT
GCCGATATTA ACGGCGATGG TGCATTAGAT TTGCTTACCG CTGGCGGAAG TGATGCAGAT
AGTGTTGCTT ACCTTCTTAA TGGTGAGCAA GAGTTATCAT CTTATGTGGT GATGGATGCA
GTTAGTGCAG ACTTTATCTT AGTAGCCGAT CTGCTTAATG ATACAGCTGT TGAGGTTGTG
CTTGCTGGTT TGTCTCAAGC TGATGTCGCA ATCTATTCAG GTTTTGGCAC TGACACTCAA
GATAGTTTGA GTATTACCGT ATCGAACCTC TTTAATTTGC CGCAACCAAA TGCATTAGTG
GCTTCGGCTC AAAATGGTCA AGAACTAAAA GAGATCGATA GCAACAAAAT TTCAGTCTCT
GCTTCGAATT CGAGTCTCGA TACAGCTGTG ACTTCACTGA GTGTTGTTCA AATCAGCGAA
GGTGTTCGCC TCCTTGCCTC TGGTGATGTT AGTGCGCCTA TATTGGTTAA TTTAGGAGAT
TGGACAACCG ATACAGTGCC AGCTATTACA ACGCCTGTAG AGAAGATGCA GCTTGTTGAT
GTGAATGGTG ATGATATTGC TGATGCCTTT ATCTATAACG ATAAGGGATG GAGCTTAATC
ACTAGCGTGT TTGAAACTGA TGCTATGGCG AGCGATGTTC AGCTCCCTGA TGCCAAATAT
ATTGTTGTTA GCGATCTTAA TAATGACGGT GTTAGCGAGA TCTTATTTAT TATGCCTCAA
GGGGTAAGCA TCTGGCATTA TTATGGGCTT AATGATATTC GTGTTGATGC CGCTGCTATT
GTGACTGAGG AGCTAGGTCA GTTAGCCTTA ATGGATATTG ATAACGATGG TGATCTGGAC
ATAGTAACAT TTGATGGACA GAAGGGAGTG TCCCTTTGGT ATATGAACTT AGCCGGAGGC
TTTGGTGAGC AAGAGATTGA TCTTACCGTT TTTGCTCAAG CTCCTAACTT CCCACAAGTT
GATCAGGCAG GTCCTATATC CTTTAGCATC CTCAATCAGT CGAGCGGTGA TGCAACTGAT
GTTAGGTTAG TGATCACCCC TTCTAGCGGC GTAAACTTAA GCCAACTCGC TAGAGGCTGC
TCTGCTGAAG GTGACAAAGT GCTGTGCCTA GTGGGAGGGT TAGCTGCCGG CGAGCGAGCT
GAGTTGACCG TCTGGGTGAG TGCGAATTCA GCTGGTGAGT ACAGTGTTGA TGGTCTTGTT
TCTGCTACTC AATTTGATGT CAATGAGGAG AATGATAAGG TGACTGTTAT GTTGAATTTG
CCCGAGCCAG CTTCATCGAG CAGTGATGCG GGGGCGACCT CAATCATGTG TACGATATGG
TTATTGATGT TGCTAGCTTA TCGTCGACGT CAATTTAGTT AA
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| Protein sequence | MKYTFNKLKS LLDCSALVFC MGATFFGSQT FAAGTDLTLS GSFSSPTIAS GHISTLTYTL
TNTSGASASD IGFTATLPSG HLIAEQTQAF SNCSDGTFAA VGGDSISTAS GYRLGAGQSC
SFMFNVTATV NGAAATLVTG LTSSLGAGSD ISTTLTVDDT LFTASASFSS SVVNLGAINR
LSLSFSNLGG TVTNGTTSVD LPSGLEIAPI ANFSSDCSLA SLNEPSGSST VTINGIWLNS
EATCTAEVDL IANSAGMMDL VWDDMFGTVS FAQVFSGKLG TSFEVQRPFA NINFNPITII
PGASGSLDVT LTNFDRSSSA TDITFSSDLD SALSGLIATG GTQVDVCGAG SSVTVGSSIN
FSGGSVSSAS SCSFSIPILV PNGAAQGAYT LTTTAISASL NGGTTNYSDT SNALIVSNTP
GLTITVLESG VTSGDDVTLR HTVTNIDNTY TATGIEFETD FVNLTGAVIK TLPATNDCGS
GSAFSSVYKF DAFTAMSMTA GELAPGASCT FDLVLTLPSG ITAGEYNVSA GAISATINSQ
AVESGTPSAS ETFIVDTAPS LVFTFNDESL LPGSSTSIDF SLSHAFASSA DATGVSFTLD
LDGVLSGLVA SNLPSEPCGA GSTLTGSGLL TFAGGSLSPS SSCDFSVDVT LPASTVGGYT
FTSSVVSATV SGNAVTSQIN SADITISGLN FSKAFATNPI RVGATGTEVD INYLITNEAG
ADDATVIQFT DSYNAMVAGT TITSADQSAF CGASSATSGS GGSFLVVSNV EVANGEQCIL
TVTINLPNSA TSGSYGANTS GLSATVGGNN VAVSPAVASL VINELSVVTS VDVSSPTSES
TINYAIEFSN AVNGFDVTDI NAVNATLANF SGSGTNYSVE VTPIADGEVI LQIASGVAVD
ANDATVPNQA AIDISFDYQS TPLVPTPSLS ISAPSAVLAN SGPVTYTVSY LDVEQVNLTA
SDITLNKTGS ANADVTIING DMSTATVSLD NLSGEGSLGI TIAEGSARFS TNIAPAAGPS
NIVVVDAVAP NVVITGPNGN QTSSFVVNID FDENMSGFTV DDIVASNGTL SDFQTINAAS
YTVQVDVTGE TSVSIDIAAG VATDSAGNGN TQSNSFNVSY DDVQPSVTIG GPSGTTATAF
TATISFSEHV SGFDVGDITV SNAGLSNFVT IDAANYSVLV TPVVQANVSL DIANSVANDL
SGNANLAASN FSLTYDFNDA PIISGAPVTS VNEDSSYSFS PTFSDADVGD TLTFSIVNKP
SWATFSSVNG TLAGTPTNDD VGSTSDIVIS VSDGALSASL AAFNLEVINT NDAPLILGTP
TTSVNEDASF SFTPTASDVD TGDSLSFSIV NKPSWATFSA TDGTLAGTPT NDDVGSTSDI
VISVSDGALS ASLAAFNLEV INTNDAPTVS GIPAASVDED VSYSFTPTVV DVDSGDSLSF
SIVNQPSWAI FSSTDGTLAG TPTNDDVGST SDIVISVSDG ALSASLTAFN LEVINTNDAP
VFESSPVLEV PAGGLYSYPL SASDIDPTYH ISFELMSGPE WLSINSEFTL EGIAPEESAG
EQFNIVVALS DGDVESPVLQ EYLLTIVEPS VTELSSRFYF TPAPATAQQE VSLVLEITNS
GLTAAEDVIF EIAISDELSI NTIPAACSES ESNKLACQLD IEIEAGGATT TLVALSVGEV
ESGFTSADVS ISGANLGGVV IEESAQLLLA NVLSVLPGDS VISTPSSVGF TVDINGDSFV
DLLSFDAMAM KTSILTNDGN GQLVISSSLD MIQDVKSMLV ADINGDGALD LLTAGGSDAD
SVAYLLNGEQ ELSSYVVMDA VSADFILVAD LLNDTAVEVV LAGLSQADVA IYSGFGTDTQ
DSLSITVSNL FNLPQPNALV ASAQNGQELK EIDSNKISVS ASNSSLDTAV TSLSVVQISE
GVRLLASGDV SAPILVNLGD WTTDTVPAIT TPVEKMQLVD VNGDDIADAF IYNDKGWSLI
TSVFETDAMA SDVQLPDAKY IVVSDLNNDG VSEILFIMPQ GVSIWHYYGL NDIRVDAAAI
VTEELGQLAL MDIDNDGDLD IVTFDGQKGV SLWYMNLAGG FGEQEIDLTV FAQAPNFPQV
DQAGPISFSI LNQSSGDATD VRLVITPSSG VNLSQLARGC SAEGDKVLCL VGGLAAGERA
ELTVWVSANS AGEYSVDGLV SATQFDVNEE NDKVTVMLNL PEPASSSSDA GATSIMCTIW
LLMLLAYRRR QFS
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