Gene Swoo_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1667 
Symbol 
ID6115908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2063461 
End bp2064474 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content39% 
IMG OID641633150 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_001760048 
Protein GI170726022 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGA TTAGTAATGT CAGCATAAAA GGTATAGCAA CTACGATTCC TTCATCTAAG 
GTCACTAATA GTGACTTGGG GGCTCTTTAT GGAGAGAAAG AGATTACAAA GTTGATTTCT
AGCGTTGGTG TGAATACTAG AAGGGTTGCT GATACCAATA CTACTTCTGC GGATCTTTGT
TATGACTCCG CAGTCAATTT AATTAATGAG CTTGAGTGGG AGCCTGAGTC AATAGGCGCT
ATCATATTTG TAAGTCAGAC TGGGGAATAT CAGCTACCAG CAACGGCTTG TATTTTACAA
AATAGACTCG GCTTACCTGT CAGTTCGATT GCTTATGATG TGAACCTTGG TTGTTCTGGG
TATACCTATG GTTTATTTTT AGCGTCAAGT CTTGTTCAAA CGGGTATTAA ACGAGTTTTA
TTGTTAGTTG GTGACACTAT TAGCAAGTTG GTAAAGCCTG GAGATCGAAG TACGGAGCTA
TTATTTGGAG ACGCAGGTAC CGCAACAGGG CTAGAGTTTG AAACTGGTCC AGTTATACAT
TTTGAGCTTG GAAGCGATGG AAGCGGCGCG GAGCATATCA TTGCTCGAAA TCCTCAACCT
CAAGTTAACT CTATTCGTGG CTTAAACTGC GCATTTTTAG AGATGAATGG TGGAGAAGTA
TTTACTTTTA CTCTTAAGCG GGTTCCATTA TTAGTTAATG GATTTTTAGA GGCTTTAGAG
TTAACAAGTA AAGATATTGA CTCATGTGTT TATCATCAAG CTAATCACTT TATGATTAAA
CATTTGTCAA AAAAGTCTAA ATTTGAACCA TCGCAAGTTC CAGTCAGTAT TACCGAGTTT
GGTAATACTA GTTGTGCCTC TATTCCGCTG ACACTATGTA CTCAAAATCT TATTTCAAGA
AATCGAATGC TGTTGGTTGG TTTTGGTGTC GGTCTTTCTT GGGGAGCTGT TATGGTAGAT
TTAAGTACAA CTAAGCTTTT ACCTGTAAGT GAGATAAAAA TCAATGAGCA ATGA
 
Protein sequence
MISISNVSIK GIATTIPSSK VTNSDLGALY GEKEITKLIS SVGVNTRRVA DTNTTSADLC 
YDSAVNLINE LEWEPESIGA IIFVSQTGEY QLPATACILQ NRLGLPVSSI AYDVNLGCSG
YTYGLFLASS LVQTGIKRVL LLVGDTISKL VKPGDRSTEL LFGDAGTATG LEFETGPVIH
FELGSDGSGA EHIIARNPQP QVNSIRGLNC AFLEMNGGEV FTFTLKRVPL LVNGFLEALE
LTSKDIDSCV YHQANHFMIK HLSKKSKFEP SQVPVSITEF GNTSCASIPL TLCTQNLISR
NRMLLVGFGV GLSWGAVMVD LSTTKLLPVS EIKINEQ