Gene Swoo_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1663 
Symbol 
ID6115904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2060850 
End bp2061989 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content37% 
IMG OID641633146 
Productglycosyl transferase group 1 
Protein accessionYP_001760044 
Protein GI170726018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TAATAATTGG TGGTGTGGCT CAATCTTTGA TCAACTTTAG GGGTGATTTG 
ATCAAGTCTT TCTTGAATGC TAATTATGAC GTTGTTTGTA TTTCAGGAGA AACGGACCAT
AAATATGTGG AGCAGTTAGA GAAGCTTGGT TGTAAATTTA TTCCGTGCAA ATTAAAAAGA
ACTAGTTTAA ACCCACTTGC TGACTTACTA TTACTTTTTA ATTTCATAAT GATTTTTCGT
CAAGAAAAAC CAGATGTTAT TTTAGCTTAT ACGATAAAGC CTGTTGTGTG GGGCGGGATA
GCATCTAAAT TATTTTCTCG AACAAAATTT TATGGGTTAA TTACAGGTTT GGGGTTTTCT
TTCCAAAAGG GAAGTCTGAA GCGTAATATC CTTTGTAGTC TAGTAAAAAG ATTATATAAG
TTTGCATTAA GTGGTGCATC TGGGGTCATA TTTCAGAACT CAGATAATCA GAATGTATTT
ATTAAAAATA GACTTATTAA CAGGGAGGTT TCAACAGTAG TTCCTGGCTC AGGAGTTAAT
TTATCGCATT TTGCTCAAAC TCCTTTACCT AAAGGGAAGA TTACCTTTCT TATGATATCT
AGATTGCTCG GCGAAAAAGG TGTTCGTGAG TATATAGAAG CTGCTAAACA AATTCGTACT
CGGTATCAAA ATGTTTCTTT TCACTTAGTT GGACCCATTG ATTCGTCGCC TGATGGGATT
CCTCAAAATG AAGTTTTAGA GTGGCAAGAG TCCAGATATA TTGAATACTT CGGTTCATCT
TCTGATGTAA GACCTTTCAT TGAGGCGTGT CATGTGTTTG TTTTACCCTC TTACCACGAA
GGAATGCCTA GAACAGTGCT AGAAGCGATG AGTATGGCTC GCCCAATTTT GACTACCGAA
GTGCCTGGTT GTAAAGATAC TGTTACTCCT GGCGTAAATG GCTTTTTGGT TCAGCACGGG
CGTGCTGACT TACTGGCTGA GAGGGTGGGG TGGTTTATAG ATAACGAAGA GTCGCTTCAA
GAAATGGGTC AAAAAAGTAG ATGTATGGCT GAAGATATAT TTGATGTTCG TAAAATTAAT
GCAAGTTTGT TTGATATTAT GAGTCTCAAG AGGAACTTTA ATGATAAAAA GACTATTTGA
 
Protein sequence
MKIIIIGGVA QSLINFRGDL IKSFLNANYD VVCISGETDH KYVEQLEKLG CKFIPCKLKR 
TSLNPLADLL LLFNFIMIFR QEKPDVILAY TIKPVVWGGI ASKLFSRTKF YGLITGLGFS
FQKGSLKRNI LCSLVKRLYK FALSGASGVI FQNSDNQNVF IKNRLINREV STVVPGSGVN
LSHFAQTPLP KGKITFLMIS RLLGEKGVRE YIEAAKQIRT RYQNVSFHLV GPIDSSPDGI
PQNEVLEWQE SRYIEYFGSS SDVRPFIEAC HVFVLPSYHE GMPRTVLEAM SMARPILTTE
VPGCKDTVTP GVNGFLVQHG RADLLAERVG WFIDNEESLQ EMGQKSRCMA EDIFDVRKIN
ASLFDIMSLK RNFNDKKTI