Gene Swoo_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1662 
Symbol 
ID6115903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2059658 
End bp2060788 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content39% 
IMG OID641633145 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001760043 
Protein GI170726017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGT TAAAAGTTGT AACTGTTGTA GGTACTCGTC CAGAAATTAT TAGGTTGTCA 
TGCACAATTG CAAAGTTAGA TGAGTTTTGT GAACATGTAC TAGTGCATAC TGGGCAAAAC
TATGATTACG AACTAAATCA AATATTCTTC GAAGACCTAG GCATTCGTGC TCCTGACATA
TTTTTAGAAT GTGCCGGCGC TACAGCTGCC GAAACCATGG CGCAAGTAAT AAGTAAAGCA
GATGCCATGT TTGCCGATGT ACAACCAGAT GCCATTTTAA TATTGGGCGA TACTAACAGT
GCAATGGCCG CGATTCCGGC AAAACGTAGA AAAATTCCAA TTTTTCATAT GGAAGCGGGC
AACCGTTGCT TTGACATGCG AGTACCAGAA GAGATCAACC GTAAAATAGT GGATCATACT
GCTGACGTCA ACATGCCTTA TACCGATATT GCGCGTGAAT ACCTATTAGC CGAAGGCTTA
AAGCCCGATC TAATTGTTAA AACCGGCAGT CCAATGGACG AAGTGCTTCA TCGTTATTCA
GATAAAATTG CTAATGCCGA AATTTTAACT ACGTTGGGTT TAACATCGGG TGAGTATTTT
GTGGTAAGCG TGCATAGAGA AGAAAATGTA GACTCTGAAA AAAATATTCA TAGTTACGTG
GACGCTTTAA ATGTTATTGC CGAAAAATAT CAGTACCCTA TTATCGTATC GACACACCCT
CGTACCAGAA AGAAAATTGA CTTACTTAAA TTAGAGTTTC ACCCCTTGGT TAAATTGTTA
AAACCGCTGG GGTTTAGTGA TTACGTAAAA TTGCAAATGG ACGCTAAAGT GGTATTAAGT
GATAGTGGAA CGATAACTGA AGAGTCGTCA ATCTTAAATT TTCCTGCGAT TAATATTAGA
GATGCACAAG AGCGCCCTGA AGGTTTTGAA GAGGGAGCTG TTATGTTTAC TGGTATGAAT
GTAGAGCGGA TACTACAAGC CATCGAAATA CTTAATAAGC AACCACGTGG TGAAGAACGA
CTAATTAAAA AAGTACAAAA CTACATAGCA CCTAATGTAT CAGATAAAGT GTTACGAACG
ATTATTAGTT ATACTGATTA TGTTGACCGG GTTGTTTGGA GAAAGCTTTA G
 
Protein sequence
MKRLKVVTVV GTRPEIIRLS CTIAKLDEFC EHVLVHTGQN YDYELNQIFF EDLGIRAPDI 
FLECAGATAA ETMAQVISKA DAMFADVQPD AILILGDTNS AMAAIPAKRR KIPIFHMEAG
NRCFDMRVPE EINRKIVDHT ADVNMPYTDI AREYLLAEGL KPDLIVKTGS PMDEVLHRYS
DKIANAEILT TLGLTSGEYF VVSVHREENV DSEKNIHSYV DALNVIAEKY QYPIIVSTHP
RTRKKIDLLK LEFHPLVKLL KPLGFSDYVK LQMDAKVVLS DSGTITEESS ILNFPAINIR
DAQERPEGFE EGAVMFTGMN VERILQAIEI LNKQPRGEER LIKKVQNYIA PNVSDKVLRT
IISYTDYVDR VVWRKL