| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1660 |
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| Symbol | |
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| ID | 6115901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2057734 |
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| End bp | 2058786 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641633143 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001760041 |
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| Protein GI | 170726015 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGTA AAGATATTTT TAGAGGGAAA ACACTATTGA TAACAGGGGG GACAGGGTCG
TTCGGAAATG CTGTTTTACG CCGTTTTTTA AATACTGAGA TTAGAGAGAT CCGTATTTTT
TCGCGTGATG AGAAAAAACA AGATGACATG CGAAAGCATT TTCAGTCAGA TAAATTAAAG
TTCTATATTG GTGATGTTCG TGACCTGCAA AGTATTTTAA GTGCTATGCG GGGGGTGGAT
TATGTCTATC ACGCTGCGGC ATTGAAGCAG GTACCGTCGT GTGAGTTCTA TCCGTTAGAA
GCCGTTAAAA CTAACGTGTT GGGAACAGAA AACGTACTCG AAGCAGCAAT CGCTAATAAT
GTTGAGCGTG TAGTGTGTCT GAGTACAGAT AAAGCTGTTT ACCCAATTAA TGCTATGGGT
ATTTCAAAAG CGATGATGGA AAAAGTTATT GTTGCTAAAA GCCGTAATCT AGAAGATAGC
AATACCACAA TTTGTTGTAC TCGCTATGGT AACGTAATGG CATCACGTGG GTCAGTTATT
CCATTGTTTA TCCGCCAGAT AGTTAATAAT GAGCCAATCA CGATTACAGA CCCTACAATG
ACTCGTTTTA TGATGACCTT AGACGATGCC GTTGACTTGG TATTACATGC TTTCAAAAAT
GGCCAAAATG GAGATATTTT TGTGCAAAAA GCGCCGGCAG CAACGATTGA GGTATTAGTA
ACTGCGTTAC TCGAAATGCT TAAAAAACCA GAGCATGTTG TAAACGTGAT TGGTACCCGC
CACGGTGAAA AATTGTTTGA AGCTCTATGT AGTCGTGAAG AAATGTTTGT TGCACAAGAG
CAAGGTGAAT ATTTTAGAGT GCCTGCAGAT AATAGAGACT TAAACTACTC AAAGTTTTTT
GAAGAAGGCG ATTCAGACCT CTCTAAGGTA GAAGATTACA ACTCGCACAA TACTGAACGT
TTAGACGTTG AAGGTATGAA GCAACTACTA CGTAAGCTTG ATTTTATGTG TGAAATTGAG
TCTGGAAACA TCATTGTTCC TGAAGGTGTT TAA
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| Protein sequence | MSGKDIFRGK TLLITGGTGS FGNAVLRRFL NTEIREIRIF SRDEKKQDDM RKHFQSDKLK
FYIGDVRDLQ SILSAMRGVD YVYHAAALKQ VPSCEFYPLE AVKTNVLGTE NVLEAAIANN
VERVVCLSTD KAVYPINAMG ISKAMMEKVI VAKSRNLEDS NTTICCTRYG NVMASRGSVI
PLFIRQIVNN EPITITDPTM TRFMMTLDDA VDLVLHAFKN GQNGDIFVQK APAATIEVLV
TALLEMLKKP EHVVNVIGTR HGEKLFEALC SREEMFVAQE QGEYFRVPAD NRDLNYSKFF
EEGDSDLSKV EDYNSHNTER LDVEGMKQLL RKLDFMCEIE SGNIIVPEGV
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