| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1651 |
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| Symbol | |
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| ID | 6115892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2046048 |
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| End bp | 2048795 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633134 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001760032 |
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| Protein GI | 170726006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.530434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTACACA AAACCAAAAA AATAATCATT GCAGGCATTA GTGCCTTAGT TTTGTTGGGC
ACGCAAGCAC AAGCTGCTAT GCCGTCTCCG CAGATGATAG AGCAATTTAA GAACTTGCCT
GCTTCAGAAC AGCAAAGACT TGCTAAACAG TACGGTATCG ACCCTTCAAT GTTAGGTGGC
GGGGCTAGCT CACAGCAGCA GCTAGAAAAT CCTACTCTTG TTAATGAGAG ACAAAACTTT
GATCGAAATG GTCAACCTAT CTATGAGCAG GATAAAGATA AAGAAGAGCT CGATTTTGAT
GAAGATAAAG CGAAAACTGA ACTGAAACGT TTTGGCTATG ATCTCTTTAG AGGTGAGCCT
ACTACATTTG CGCCAGTTTC AGATGTTCCT GTACCTAGTG AATATTTAGT CGGTCCTGGT
GACAATATTA AAGTCCAACT TTACGGTAAA GATAACAAAG AATACGACTT AGTTATTAAC
CGTGAGGGTG AGATTCAATT CCCTGAGCTT GGGCCAATCT CAGTTAACGG ATTAACTTTT
GCCGAGCTAC GAAAAATCTT AACTTCCCGT ATCAGCGAGC AGATGATAGG TATCGAATCT
AACATCACCA TGGGTAAGCT GCGCTCTATT CGTATTTTTG TTGCTGGTGA TGCCTACAAG
CCTGGTTCAT ACACTGTTTC AAGTTTATCT ACGATAACTC AAGCACTGTT TGTTTCAGGT
GGTGTAAATG AGATTGGTTC ACTGCGTAAT ATTCAGCTAA AGCGTAATGG CAAATTAATC
GGCACCATGG ATCTTTACGA TCTGCTTATG CGTGGCGATG CATCTAGCGA TCTAATGCTC
CGCTCTGGTG ATGTGGTATT TATCCCATCA GTGGGTGGTT TAGTTCGTGT GACCGGTGAG
GTTCGTCGTC CTGCTATCTA TGAGTTAAAA AACCGTGAAA CACTGGCTGA TGTTTTATCC
ATGGCTGCGG GTTTAAAGTC GGGTGCTTAT CCAAGAAGTA GTAGTATAGA GCGTTTCAAT
ACGAATGGTT TAAAAACAGT TAAAAATGTT GACCTTACTT CAGCACAAGG TCAAAAAGTT
AAGGCTCTAG CGGGTGATGT TGTACGTGTA AAATCTGCTT CTAATCAGTT TGAAGACGCC
ATCACAGTTG TTGGTGCAGT TGTAAGGCCA GGTAAGTATC AATGGTATCA AGGTCAAAAG
ATTAGCGATC TGGTTCCGTC AATTTGGGGC GATCTATCGG CTTCTGCAGA CTTAGACTAT
GGCATTATTG TTCGTGAAGT TAATCAGTAC GGTGATATTG AAGTCCATCA ATTTGAGCCC
GGTAAAGCTA TCAGTCAAAA AGTTGCAACT GATGACCTAC TATTAAATGC ACGTGATAAG
GTTATCTTCT TCAACTTTAG TGATAAAAGT CAAAATCGTT ACGAGTTAAA TAAATTAGTT
AAAGAACGCG TTTTAAAGGT CACTGAGCTT GCTGGTGACT CATTGGTTGG TAACGATCTT
TTTAAAGCTG GCTTTGCGCA ACTGCAACAG AAAGGGTTAA CAGAGCGAAG TGAGATCGGT
GGTGTTGTTA TCGCAAAAGA GGCTGATGAT AACGAGCAGC AAGCCATTAT TGGGGAGGTC
AACAAGATGT TGATTAACCT GTTTGATGAT AAAGACTTGA TAAAGCTTAG TTCGGCGATG
AACCGCAGTG AGCTGCTTTA CCCTGTTGTG ATGAAATTAA CCACTCAAGG TCGTTCAGGC
AAAGAGGTTA AAGTTGTCGC TGTTAATGGC AAGGTTCGTC ACTCTGGTAT CTATCCACTA
GCCGTAAATG CAAGAGTTGA TGACTTAATA AAAGCGGGTG GTGGCCTTCA AGAAGGTGCC
TATACCGCAA GAGCAGAATT AACAAGCACC TTAATAGACA GCCAAGGCTC AAGTATTCAA
CATCAAAATA TCGATCTGAA AGCAGCTATT CAAGGTGATG CGACTGTCAA TGCAAAACTC
AAAGGTCGCG ATATTTTAAC CGTGATGACA ACACCGGATT GGCAAGAAAA TAAATCTGTT
GAGATCCGTG GTGAAGTTAA ATTTCCTGGC ATGTATAACA TTCGTCGCGG CGAGACACTT
AAAGATGTGC TAAATCGCGC TGGTGGATTT ACAGAGTTTG CTTACCTACC ATCAGCGGTA
TTTGTGCGGG AATCAGTACG CCAACAAGAA CAGCTTGAGA TTAAAAAGCT TGCTAATCAA
CTCCGCCGCG ATATCGCAAC TCGCGGTGTA TCGAAAGATG GCAATGTTGT AAATTATAGC
GATGCTCAGA TGATGCTCAC CGACCTTGAA AACATCAAAG CTGTCGGGCG CTTAGTTGTT
GATTTATCTG CAATATCAGT TGGTATTGAA CAAGCAGATC TTCAACTCGA AGACTCAGAT
ATCTTATATG TCCCCTCCAC TAAGCAAACC ATTGCAGTAA TGGGCGAAGT ACAACATGCT
GCAACGCATA GATTCAAGAA GGGCTTAACG CTAGATCAGT ATCTTGCCAT GTCTGGTGGC
GAGAGAGAGC GTGCAGATGG TGATAGAACC TATGTGATTA AAGCGAACGG TTCTGTACTG
CTTCCAAGCC GCTCAATCTG GTTCAGCAGT GAAGACAGCC TTCAACCTGG TGATACGATT
ATCGTACCGC TTGATACAGA ATACAAAGAT AACCTAACAC TCTGGACGCA GGTAACCAGC
ATCATCTACA ACACAGCAGT AGCATTCGCT ACAGTCGCGA ACTTGTAA
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| Protein sequence | MLHKTKKIII AGISALVLLG TQAQAAMPSP QMIEQFKNLP ASEQQRLAKQ YGIDPSMLGG
GASSQQQLEN PTLVNERQNF DRNGQPIYEQ DKDKEELDFD EDKAKTELKR FGYDLFRGEP
TTFAPVSDVP VPSEYLVGPG DNIKVQLYGK DNKEYDLVIN REGEIQFPEL GPISVNGLTF
AELRKILTSR ISEQMIGIES NITMGKLRSI RIFVAGDAYK PGSYTVSSLS TITQALFVSG
GVNEIGSLRN IQLKRNGKLI GTMDLYDLLM RGDASSDLML RSGDVVFIPS VGGLVRVTGE
VRRPAIYELK NRETLADVLS MAAGLKSGAY PRSSSIERFN TNGLKTVKNV DLTSAQGQKV
KALAGDVVRV KSASNQFEDA ITVVGAVVRP GKYQWYQGQK ISDLVPSIWG DLSASADLDY
GIIVREVNQY GDIEVHQFEP GKAISQKVAT DDLLLNARDK VIFFNFSDKS QNRYELNKLV
KERVLKVTEL AGDSLVGNDL FKAGFAQLQQ KGLTERSEIG GVVIAKEADD NEQQAIIGEV
NKMLINLFDD KDLIKLSSAM NRSELLYPVV MKLTTQGRSG KEVKVVAVNG KVRHSGIYPL
AVNARVDDLI KAGGGLQEGA YTARAELTST LIDSQGSSIQ HQNIDLKAAI QGDATVNAKL
KGRDILTVMT TPDWQENKSV EIRGEVKFPG MYNIRRGETL KDVLNRAGGF TEFAYLPSAV
FVRESVRQQE QLEIKKLANQ LRRDIATRGV SKDGNVVNYS DAQMMLTDLE NIKAVGRLVV
DLSAISVGIE QADLQLEDSD ILYVPSTKQT IAVMGEVQHA ATHRFKKGLT LDQYLAMSGG
ERERADGDRT YVIKANGSVL LPSRSIWFSS EDSLQPGDTI IVPLDTEYKD NLTLWTQVTS
IIYNTAVAFA TVANL
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