| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1650 |
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| Symbol | |
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| ID | 6115891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2043917 |
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| End bp | 2044456 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633133 |
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| Product | transcriptional acivator RfaH |
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| Protein accession | YP_001760031 |
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| Protein GI | 170726005 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0204524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATGA AAGCTTGGTA CCTTCTATAT TGTAAGCCAC GTGGCGAAGC CAGAGCTGTA
CATAACTTAA CTCTTCAAAA TATTGATACT TACCTTCCTA CTATAGGCGA AGAGAAGAGA
GTAAAAGGAG AGGTAAGTAT TAAGCGTATC CCACTTTTCC CTGGCTATCT TTTTATCAAT
ATCGATCCAC AAGTGACCAG TGTTGCGCGA ATTCACTCAA CCCGTGGAGT GGGTCGTATC
GTTGGATGTA ATGAGCTAAT GACCTCTATT GACGATTCAA TTATCCACAG CATTCGCTTA
CGTGAACATA AGCTGCTATC TGAGTTATTG CCTGCAAGTG AGTTATCACA GAAGTGTGAT
GGCTCTTCAA CAGTAGAGAT AAATCCTGGC GATCAGGTTA AGTTTACTGA AGGACCATTT
GCTGATTTAG AGGGGATCTT TGCCGAGAAA AGCGGTGATA AACGCTGTCA TGTTCTTTTT
GAGATTATGG GGCAGAAGAA GCGAGTTTCA GTGCCCAGAG ACAGTATAAA ACCTGTTTAA
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| Protein sequence | MTMKAWYLLY CKPRGEARAV HNLTLQNIDT YLPTIGEEKR VKGEVSIKRI PLFPGYLFIN
IDPQVTSVAR IHSTRGVGRI VGCNELMTSI DDSIIHSIRL REHKLLSELL PASELSQKCD
GSSTVEINPG DQVKFTEGPF ADLEGIFAEK SGDKRCHVLF EIMGQKKRVS VPRDSIKPV
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