Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1649 |
Symbol | |
ID | 6115890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2041269 |
End bp | 2042741 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633132 |
Product | amino acid/peptide transporter |
Protein accession | YP_001760030 |
Protein GI | 170726004 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000051541 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAG CAAAACCCCA AGGGACGATG CTCGGGCATC CGAAGGGATT GTTCCTGTTG TTTACAACAG AGTTATGGGA ACGATTCAGC TATTACGCAA TGCGTGCCAT TTTGGTACTT TATTTGGTAG ATAGTGTTCA ATCACAAGGT GGTCATGGTT TAGGTTGGAC TAGCGCTGAC GCCCTCTCTC TTTACGGTAC ATTCACAGGT TTAGTCTATT TAACACCACT TATCGGTGGC TGGTTAGCTG ATACATATTT AGGCCAACGT CGTGCCATTA TCATTGGTGG TGCCTTAATG GCCGCAGGCC AATTCATTTT AGGTACACCC CATGCTTGGG TACCAGGAAT GGAAACTGAA GTTTTCTACC TAGGTCTTGG TGTACTTATT TTAGGTAATG GTCTATTTAA GCCAAATATC TCAACCATGG TTGGTGATCT TTATGAAGAG GGCGACCACC GTCGTGACGG TGCTTTTACT ATCTTCTACA TGGGTATCAA CGTTGGTGCA TTCCTTTCAG GTATTATTGT TGGTTCTGTT GTAGCTTACT TCGACGGTAA CTTCCAAGCA GGCTTCATCT GTGCCGGTAT TGGTATGGTT CTATCATTAA TTATTCAGTT CATGTTTGCT CAAAAGCTAC TTGGTGATAT TGGTCGTAGA CCAGCTGCAC AACTTGAAAA AGAGAAAGCT GCTGAAAAAG GTGAAGTACG TAAAGAGCCT CTGACAAAAG TTGAACGTGA CCGTATCAAA GTTATTATGA TCATGGGTCT ATTCACCATC ATCTTCTGGG CTGGCTTTGA ACAGGCTGGC GGTCTAATGA ACCTGTTCAC CAATGACTTC ACAGACAGAA GCATAGGCAG TTGGGAAGTT CCTACGACTT GGTTCCAATC ACTGAATGCG ATGTTTATCG TTATTTTTGC ACCAGTTGTG GCTTCAATTT GGATCCGCTT AGGTAAGAAT GAGCCAAACT CGCCAGTGAA ATTTGCTTTA GGTCTTGTTC TGCTGGGTAT CGGCTTCCTA TTTATGATTG GTGCAGTACT TGAAATGGGC GGCGATGCCA ATGCTAAATC AAGCATGTGG TGGTTAGTCG GTGCCTACTT CTTCCATACC ATGGGTGAAC TTTGTCTATC TCCAATTGGT CTTTCAATGG TGACTAAACT TGCTCCGCTA CGTATCGCAT CACTAATGAT GGGTGCCTGG TTCCTATTCG TTGCTGCAGC GAATAAGATT GGTGGTGTTG TAGGTTCATT TATCGGTCAC GGTGGTCCAA AAGAGGAGCA ACTTGCCAAT GCAATGTCTA TCTTCGCAGG TATTGCAATT ACCGCAGCAG CTTCTGGTAT CCTACTTTAC TTTATGGCTG ATAAATTAGT CGACTGGATG CACGGTGCTG AAGACGGCCC TGTACACACA GAAGAAGAAG CGCTTGAAGA AGAGATGGCT GTGACTGCAG AGCATGAAGG TATAAAGCAC TAA
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Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDSVQSQG GHGLGWTSAD ALSLYGTFTG LVYLTPLIGG WLADTYLGQR RAIIIGGALM AAGQFILGTP HAWVPGMETE VFYLGLGVLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINVGA FLSGIIVGSV VAYFDGNFQA GFICAGIGMV LSLIIQFMFA QKLLGDIGRR PAAQLEKEKA AEKGEVRKEP LTKVERDRIK VIMIMGLFTI IFWAGFEQAG GLMNLFTNDF TDRSIGSWEV PTTWFQSLNA MFIVIFAPVV ASIWIRLGKN EPNSPVKFAL GLVLLGIGFL FMIGAVLEMG GDANAKSSMW WLVGAYFFHT MGELCLSPIG LSMVTKLAPL RIASLMMGAW FLFVAAANKI GGVVGSFIGH GGPKEEQLAN AMSIFAGIAI TAAASGILLY FMADKLVDWM HGAEDGPVHT EEEALEEEMA VTAEHEGIKH
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