Gene Swoo_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1632 
SymbolflhA 
ID6115873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2022609 
End bp2024708 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content45% 
IMG OID641633115 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001760013 
Protein GI170725987 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTA AAGCAAGCCT AGGTCAGTTT AAAAATATTA AACCTGCTCA TTTTAAAGGG 
GTGGGGACTC CGTTACTTGT GCTGGCAGCC TTGGCGATGA TTGTGTTGCC AATACCTGCA
TTTCTGCTTG ATATCCTGTT TTCTTTTAAT ATCTCATTAG CATTAGTTAT TTTACTTGTG
GCTATCTATA CGGATAGGCC GTTAGATTTT GCCGCTTTCC CTAGTGTTCT GTTGGTTGCG
ACCCTATTGC GGTTAGCGCT TAATGTGGCT TCGACTCGAG TGGTGTTACT TGAAGGGCAT
AATGGTGGCG ATGCTGCTGG TAAAGTGATT GAAGCCTTTG GTTCAGTGGT CATTGGCGGT
AACTACGCCG TCGGACTGGT TGTATTTTTA ATCCTCATTA TCATCAACTT TGCCGTTGTA
ACAAAAGGTG CTGGTCGAAT TTCAGAGGTG AGTGCTCGCT TTACCTTGGA TGCTATGCCG
GGCAAGCAGA TGGCCATTGA TGCCGATCTA AATGCGGGTG TGCTCAATCA AGACCAAGCC
AGAATAAGAC GTGCTGAAGT GACAAAAGAA GCCGATTTTT ATGGTGCAAT GGATGGTGCT
TCTAAATTTG TAAAAGGTGA TGCCATAGCG GGGATAATGA TCTTAGTGAT TAATATTCTA
GGTGGTTTTG TTATCGGTAT GGTGCAGCAC GACCTTGATT TTTCAACTGC GGTTGAGATC
TACACTCTGC TTACCATTGG TGACGGCCTA GTGGCTCAAA TCCCTGGCCT ACTTCTATCA
ATAGCCGCTG CATTGATGGT GACACGTCAA AACGAGTCTG GTGACATGGG CCAGATGATG
ATGAGCCAGA TGTTTGACAG TCCTAAATCA ATTGCTATCG CATCAGGTGT GTTGTTGATC
ATGGGAATTG TCCCGGGCAT GCCCCATTTC GCTTTTATCT CTTTCGGTAT AATCACGGCT
TCTATTGCTT ACTTTCTTTA CCGAAAACAA GAGAGTAAGC GAGCGCATGC ATTAGAGCTT
GCGCAAAAAT CTCCTGCTGA AACCGCTGAT GCTAAACCAA AAGAGTTAAG TTGGGATGAT
GTACAACATG TTGACACTAT TGGTTTAGAG GTGGGGTATC GTTTAATTCC TCTTGTTGAT
AAAGGTCAAG GCGGTGAGCT GCTTGGTCGA ATAAAAGGTG TGCGTAAGAA GCTTTCTCAA
GAGTTGGGCT TCTTAGTACC GGCTGTGCAT ATACGCGATA ATTTAGATCT CTCTCCAAAC
AGCTATCGGA TCTCTTTGAT GGGAGTTGCC TCTGGTGAAG CTGATATCAG GCATGATTGT
GAGTTAGCGA TTAACCCTGG GCAAGTGTAC GGAAAACTTG ATGGGGTTGA AACTACAGAT
CCCGCTTTTG GCTTAGAGGC CGTTTGGATC GCTCCAGAGC TAAGAGAACA CGCGCAATCA
TTAGGTTATA CCGTCGTAGA TGCTGCCACG GTTGTTGCTA CTCATTTAAG TCAACTACTA
ACGAACAATG CGGCCAAATT ACTGGGGTAT GAAGAGGTTC AACAGTTGAT GGATATGCTG
AAGAAGCACT CTCCTAAGCT TGTGGATGGA TTTATTCCTG ATGTTATGCC CTTGGGGACA
GTGGTTAAAG TGATGCAGAA TCTACTTAAT GAAGGTGTTT CTATTCGCGA CCTTAAGACG
ATAGTGCAAA CTTTGTTAGA GTATGGGCCA AAGAGTGCTG ATACAGAAGT GCTTACAGCA
GCGGTTCGAA TTTCGTTAAA ACGTATGATT GTTCAGGAGA TCAGCGGGCC AGAAACTGAA
ATCCCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC TATGCAAGCG
ACAGGGGGGG AAGGTCCGAA TATCGAACCG AGTCTTGCTG AACGAATGCA GAAGTCATTA
GAAGATGCAT CCCAAAGACA AGAGATGATA GGGCAACCCG CAATATTGCT TACTTCAGGT
ATGCTACGTT CAACCCTATC TAGGTTTGTT AAGCATACAA TCCCGAATCT AAGGGTTATC
TCCTATCAGG AAGTACCCGA TGAAAAGCAG ATAAGAATAG TGTCTGCGGT TGGCCAGTAG
 
Protein sequence
MDVKASLGQF KNIKPAHFKG VGTPLLVLAA LAMIVLPIPA FLLDILFSFN ISLALVILLV 
AIYTDRPLDF AAFPSVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG
NYAVGLVVFL ILIIINFAVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGVLNQDQA
RIRRAEVTKE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFVIGMVQH DLDFSTAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM MSQMFDSPKS IAIASGVLLI
MGIVPGMPHF AFISFGIITA SIAYFLYRKQ ESKRAHALEL AQKSPAETAD AKPKELSWDD
VQHVDTIGLE VGYRLIPLVD KGQGGELLGR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN
SYRISLMGVA SGEADIRHDC ELAINPGQVY GKLDGVETTD PAFGLEAVWI APELREHAQS
LGYTVVDAAT VVATHLSQLL TNNAAKLLGY EEVQQLMDML KKHSPKLVDG FIPDVMPLGT
VVKVMQNLLN EGVSIRDLKT IVQTLLEYGP KSADTEVLTA AVRISLKRMI VQEISGPETE
IPVITLAPEL EQMLHQSMQA TGGEGPNIEP SLAERMQKSL EDASQRQEMI GQPAILLTSG
MLRSTLSRFV KHTIPNLRVI SYQEVPDEKQ IRIVSAVGQ