Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1632 |
Symbol | flhA |
ID | 6115873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2022609 |
End bp | 2024708 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633115 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001760013 |
Protein GI | 170725987 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTA AAGCAAGCCT AGGTCAGTTT AAAAATATTA AACCTGCTCA TTTTAAAGGG GTGGGGACTC CGTTACTTGT GCTGGCAGCC TTGGCGATGA TTGTGTTGCC AATACCTGCA TTTCTGCTTG ATATCCTGTT TTCTTTTAAT ATCTCATTAG CATTAGTTAT TTTACTTGTG GCTATCTATA CGGATAGGCC GTTAGATTTT GCCGCTTTCC CTAGTGTTCT GTTGGTTGCG ACCCTATTGC GGTTAGCGCT TAATGTGGCT TCGACTCGAG TGGTGTTACT TGAAGGGCAT AATGGTGGCG ATGCTGCTGG TAAAGTGATT GAAGCCTTTG GTTCAGTGGT CATTGGCGGT AACTACGCCG TCGGACTGGT TGTATTTTTA ATCCTCATTA TCATCAACTT TGCCGTTGTA ACAAAAGGTG CTGGTCGAAT TTCAGAGGTG AGTGCTCGCT TTACCTTGGA TGCTATGCCG GGCAAGCAGA TGGCCATTGA TGCCGATCTA AATGCGGGTG TGCTCAATCA AGACCAAGCC AGAATAAGAC GTGCTGAAGT GACAAAAGAA GCCGATTTTT ATGGTGCAAT GGATGGTGCT TCTAAATTTG TAAAAGGTGA TGCCATAGCG GGGATAATGA TCTTAGTGAT TAATATTCTA GGTGGTTTTG TTATCGGTAT GGTGCAGCAC GACCTTGATT TTTCAACTGC GGTTGAGATC TACACTCTGC TTACCATTGG TGACGGCCTA GTGGCTCAAA TCCCTGGCCT ACTTCTATCA ATAGCCGCTG CATTGATGGT GACACGTCAA AACGAGTCTG GTGACATGGG CCAGATGATG ATGAGCCAGA TGTTTGACAG TCCTAAATCA ATTGCTATCG CATCAGGTGT GTTGTTGATC ATGGGAATTG TCCCGGGCAT GCCCCATTTC GCTTTTATCT CTTTCGGTAT AATCACGGCT TCTATTGCTT ACTTTCTTTA CCGAAAACAA GAGAGTAAGC GAGCGCATGC ATTAGAGCTT GCGCAAAAAT CTCCTGCTGA AACCGCTGAT GCTAAACCAA AAGAGTTAAG TTGGGATGAT GTACAACATG TTGACACTAT TGGTTTAGAG GTGGGGTATC GTTTAATTCC TCTTGTTGAT AAAGGTCAAG GCGGTGAGCT GCTTGGTCGA ATAAAAGGTG TGCGTAAGAA GCTTTCTCAA GAGTTGGGCT TCTTAGTACC GGCTGTGCAT ATACGCGATA ATTTAGATCT CTCTCCAAAC AGCTATCGGA TCTCTTTGAT GGGAGTTGCC TCTGGTGAAG CTGATATCAG GCATGATTGT GAGTTAGCGA TTAACCCTGG GCAAGTGTAC GGAAAACTTG ATGGGGTTGA AACTACAGAT CCCGCTTTTG GCTTAGAGGC CGTTTGGATC GCTCCAGAGC TAAGAGAACA CGCGCAATCA TTAGGTTATA CCGTCGTAGA TGCTGCCACG GTTGTTGCTA CTCATTTAAG TCAACTACTA ACGAACAATG CGGCCAAATT ACTGGGGTAT GAAGAGGTTC AACAGTTGAT GGATATGCTG AAGAAGCACT CTCCTAAGCT TGTGGATGGA TTTATTCCTG ATGTTATGCC CTTGGGGACA GTGGTTAAAG TGATGCAGAA TCTACTTAAT GAAGGTGTTT CTATTCGCGA CCTTAAGACG ATAGTGCAAA CTTTGTTAGA GTATGGGCCA AAGAGTGCTG ATACAGAAGT GCTTACAGCA GCGGTTCGAA TTTCGTTAAA ACGTATGATT GTTCAGGAGA TCAGCGGGCC AGAAACTGAA ATCCCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC TATGCAAGCG ACAGGGGGGG AAGGTCCGAA TATCGAACCG AGTCTTGCTG AACGAATGCA GAAGTCATTA GAAGATGCAT CCCAAAGACA AGAGATGATA GGGCAACCCG CAATATTGCT TACTTCAGGT ATGCTACGTT CAACCCTATC TAGGTTTGTT AAGCATACAA TCCCGAATCT AAGGGTTATC TCCTATCAGG AAGTACCCGA TGAAAAGCAG ATAAGAATAG TGTCTGCGGT TGGCCAGTAG
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Protein sequence | MDVKASLGQF KNIKPAHFKG VGTPLLVLAA LAMIVLPIPA FLLDILFSFN ISLALVILLV AIYTDRPLDF AAFPSVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG NYAVGLVVFL ILIIINFAVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGVLNQDQA RIRRAEVTKE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFVIGMVQH DLDFSTAVEI YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMM MSQMFDSPKS IAIASGVLLI MGIVPGMPHF AFISFGIITA SIAYFLYRKQ ESKRAHALEL AQKSPAETAD AKPKELSWDD VQHVDTIGLE VGYRLIPLVD KGQGGELLGR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN SYRISLMGVA SGEADIRHDC ELAINPGQVY GKLDGVETTD PAFGLEAVWI APELREHAQS LGYTVVDAAT VVATHLSQLL TNNAAKLLGY EEVQQLMDML KKHSPKLVDG FIPDVMPLGT VVKVMQNLLN EGVSIRDLKT IVQTLLEYGP KSADTEVLTA AVRISLKRMI VQEISGPETE IPVITLAPEL EQMLHQSMQA TGGEGPNIEP SLAERMQKSL EDASQRQEMI GQPAILLTSG MLRSTLSRFV KHTIPNLRVI SYQEVPDEKQ IRIVSAVGQ
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