| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1622 |
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| Symbol | |
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| ID | 6115863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2014501 |
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| End bp | 2014947 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633105 |
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| Product | flagellar export protein FliJ |
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| Protein accession | YP_001760003 |
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| Protein GI | 170725977 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAGC ATGATCCGTT AGATACAGTG TTAAAACTTG CAAAAGAAGC TGAAGAGCAA
GCGGGCTTGC AGCTTAAGTC TGCGCAATTG ATGTTGCAAA AGTGCCAGAG TCAACTTGAA
GCGCTGAGGA ACTACCGTCT CGATTATATG AAACAGATGG AAAATCATCA CGGTAAAAAT
ATCAGTGCCA GTTATTACCA TCAATTTCAT CAATTTGTCA GACAGATAGA TGAAGCGATT
ACTAAACAGA TCTCCTCTAT TCAGGAGGCT GACTCCCAGA GAGAGCACAG ACAGAAATAT
TGGCAGGAGA TGCAACAAAA AAGGAAAGCT GTTGAACTGC TGCTCTCTCA TAAAGCAGAT
AAAGCTCAAC AAGCTGAACT AAGGCGTGAA CAGAAGATGA CTGATGAGTT CGCATCTCAA
CTGTTTTATC GAAAACGTGC TCGTTAA
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| Protein sequence | MAKHDPLDTV LKLAKEAEEQ AGLQLKSAQL MLQKCQSQLE ALRNYRLDYM KQMENHHGKN
ISASYYHQFH QFVRQIDEAI TKQISSIQEA DSQREHRQKY WQEMQQKRKA VELLLSHKAD
KAQQAELRRE QKMTDEFASQ LFYRKRAR
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