| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1614 |
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| Symbol | |
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| ID | 6115855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2004543 |
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| End bp | 2005976 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633097 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001759995 |
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| Protein GI | 170725969 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAA CAGATCAACG AATTCTACTT GTCGGTAACC AGTCTGAGCG AATGAATCGC
TTATCTTGTG TATTTGAGTT TTTAGGTGAA CAAGTTGAGT TAGTCGCAGT CGATAAACTC
GAACTGCGAG TTCATAACAC TCGATTTCGA GCTTTAATCA TCTCATCCGA CATACAGTCT
AAAGAGTTAC TACAAACTCT TGCAGCTACC TTGCCTTGGC AGCCGATATT ATTGCTTGGC
GAGATGGATG GCGCTGTTGC GTCTAATATA CTCGGCCATA TTGAGGAGCC TCTAAATTAT
CCTCAGCTGA CAGAGCTTCT TCACTTCTGT CAGGTTTTTG GGCAAGCTAA ACGTCCAGAT
ATTCCTACTA GTGTAAACCA AACCAAACTG TTCAGAAGCA TGGTTGGCAG AAGTGATGGC
ATTGCCCAGG TTCGTCATTT GATCAACCAA GTTGCTCCCT CAGATGCGAC AGTGCTTGTC
CTTGGCCAAT CCGGTACAGG TAAAGAGGTG GTGGCGAGGA ACATCCACTA TATTTCAGAT
CGCCGTGATG GGCCCTTTAT ACCCGTTAAC TGTGGTGCAA TCCCTCCTGA GCTTCTTGAA
AGTGAACTTT TTGGTCATGA AAAGGGATCC TTTACTGGAG CGATAAGTGC ACGAAAAGGG
CGCTTTGAAC TTGCAGAGAA AGGAACACTT TTCTTAGATG AAATTGGTGA TATGCCTCTG
CAGATGCAGG TGAAATTGCT TCGAGTTCTT CAGGAAAAAG TGTTTGAAAG AGTCGGTGGT
TCTAAATCGA TTACTACTGA TGTACGTGTT GTCGCGGCAA CGCACCGTCA ACTAGAGTCA
ATGATTTTAG AGGGAGAGTT TAGGGAAGAT CTCTATTATC GTTTGAATGT CTTTCCTATC
GAAATGCCAG CTTTATGCGA GCGTAAAGAT GATATCCCGC TGCTTTTGCA AGAACTTGTT
AGCCGAGTGT ATAACGAAGG GCGTGGCAAA GTTCGTTTTA CTCAAAGAGC AATCGAGTCA
TTAAAAGAGC ATGCTTGGTC AGGTAATGTC CGTGAGCTGT CTAACTTGGT TGAGCGTTTA
ACGATTCTTT ACCCAGGTGG GTTGGTTGAT GTTAATGATC TGCCAGTAAA GTATCGTCAT
ATTGATGTGC CTGAATACTG TGTAGAGGTC AGTGAAGAGG AGCAAGAGCG TGATGCGCTC
GCTTCCATAT TCAACAGTGA CGAGCCTGTC GATATTCCTG AGACACGTTT CCCTAGTGAA
CTTCCGCCCG AAGGCGTTAA TCTTAAAGAT CTATTAGCTG AGCTCGAAAT TGATATGATT
AGACAGGCAT TGGAACAACA AGATAATGTG GTTGCCAGAG CCGCTGAGAT GTTGGGCATT
AGGCGAACAA CCTTAGTTGA AAAGATGAGA AAGTATGGAA TGGGAAAAGA GTAA
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| Protein sequence | MMQTDQRILL VGNQSERMNR LSCVFEFLGE QVELVAVDKL ELRVHNTRFR ALIISSDIQS
KELLQTLAAT LPWQPILLLG EMDGAVASNI LGHIEEPLNY PQLTELLHFC QVFGQAKRPD
IPTSVNQTKL FRSMVGRSDG IAQVRHLINQ VAPSDATVLV LGQSGTGKEV VARNIHYISD
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISARKG RFELAEKGTL FLDEIGDMPL
QMQVKLLRVL QEKVFERVGG SKSITTDVRV VAATHRQLES MILEGEFRED LYYRLNVFPI
EMPALCERKD DIPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPVKYRH IDVPEYCVEV SEEEQERDAL ASIFNSDEPV DIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALEQQDNV VARAAEMLGI RRTTLVEKMR KYGMGKE
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