Gene Swoo_1598 details

Gene Information

• Locus tag: Swoo_1598
• Symbol: flgC
• ID: 6115839
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella woodyi ATCC 51908
• Kingdom: Bacteria
• Replicon accession: NC_010506
• Strand: +
• Start bp: 1988948
• End bp: 1989367
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641633081
• Product: flagellar basal body rod protein FlgC
• Protein accession: YP_001759979
• Protein GI: 170725953
• COG category: [N] Cell motility
• COG ID: [COG1558] Flagellar basal body rod protein
• TIGRFAM ID: [TIGR01395] flagellar basal-body rod protein FlgC; [TIGR01396] flagellar basal-body rod protein FlgB

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGAGTT TATTCAATAT TTTTAACGTT TCAGGCTCAG GTATGTCGGC TCAATCGGTA 
AGATTGAACA CCACTGCCAG TAATATTGCC AATGCCGATT CAGTCTCCAG TAGCATTGAT 
GAGACATACC GTGCAAGGCA TCCCATTTTT GAAGCTGAGA TGGCTAAAGC TAGTCATCAG 
CAGCAATCAT CACAATCTGT TGCCGTTAAG GGCATAGTTG AGAGTGATGC GCCTTTGCAG 
AAGGAGTACT CTCCTAATCA TCCAATGGCT GATACAGATG GCTTTATCTA TAAACCGAAT 
GTGAACGTGA TGGAGGAGAT GGCGGATATG ATCTCGGCGT CTCGCTCATA TCAGATGAAT 
GTGCAGGTTG CTGAAGCGGC AAAGTCTATG CTTCAGCAAA CCTTAAGAAT TGGCAAATAG 

 

Protein sequence

MMSLFNIFNV SGSGMSAQSV RLNTTASNIA NADSVSSSID ETYRARHPIF EAEMAKASHQ 
QQSSQSVAVK GIVESDAPLQ KEYSPNHPMA DTDGFIYKPN VNVMEEMADM ISASRSYQMN 
VQVAEAAKSM LQQTLRIGK