| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1586 |
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| Symbol | |
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| ID | 6115826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1976262 |
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| End bp | 1977410 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633068 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001759967 |
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| Protein GI | 170725941 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.257863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCAT TAGTTAAGTT TATTCGAGAA ACCTATCAAA CCAATGAGTT TATTCCTTTG
CATGCTCCAA CGTTTGCAGG CAACGAACAG GCTTATGTTG CAGAGACAAT AACCAGTACT
TTTGTGTCTA GTGTTGGCAA GTTTGTCACT GATTTCGAGC AAAAAATTGA AGCTTTTACT
CAGTCTCCTA AAGCCATTGC CACTTCGAGC GGTTCCAGTG CCTTGCACAC CGCTTTATAC
ATGGCAGGGG TACAAAGTGG CGATCTGGTG ATCACTCAAT CCCTGACTTT TGTTGCCACT
TGCAATGCCT TATATCACAT GGGCGCAGCA CCTATTTTTG TCGATATTTC TACCGTGAGC
TTAGGGTTAA GCCCACAAGC TGTGCAAACT TACCTCGAAG AGTATGGGCT TCTTAATGAA
GAGGGCTTAT GTATTCACAA AGAGACGAAG CAAACCATCA AAGCTGTGAT GCCTATGCAT
ACCTTTGGTC ACCCCGTTGA ACTGGATGAA TTAGTGCTCA TTTGCCAGCA ATGGAATCTT
GTTTTAATTG AAGATGCCGC CGAAAGTTTA GGCTCACGCT ATAAAGAAAA ACATACGGGG
ACAATAGGTG AATTTGCCGC ACTTAGTTTC AACGGCAATA AGATAATCAC CACCGGTGGC
GGTGGAGTGT TGCTCACGAA TAACCAAGCC AATGGCATAC GAGCAAAACA CATAACAACA
ACCGCAAAGG TGCCCCACCC TTACGAGTTT TATCATGATG AAGCCGGCTT TAATTACCGA
ATGCCTAACT TAAATGCTGC ACTTGGTTGT GCTCAAATGG AGAGTCTACC TCTGTTTATC
GAACAAAAAC GCGCTCTAGC AATGCATTAC AACAGCTTCT TTGATGGCGG CGAATTGCTT
TTTGTCCAAG AGCCGAGTTA CGCAAAATCG AACTATTGGC TCAATGCGGT TATTTGTCCC
AATCTTCATA GTCGTGACAA ACTGCTCAAG TTAACCAACG ATAGTGGGGT GATGACTCGG
CCAGTCTGGC AACTGATGCA TCGCCTTCCC ATGTTTAAAG ATGCGTTGCG TGGTTCACTT
CAGCACTCAG AATGGTTTGA AGAGCGTCTG GTAAATTTAC CAAGTAGTCC AATCAACACG
AGAATATAA
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| Protein sequence | MSSLVKFIRE TYQTNEFIPL HAPTFAGNEQ AYVAETITST FVSSVGKFVT DFEQKIEAFT
QSPKAIATSS GSSALHTALY MAGVQSGDLV ITQSLTFVAT CNALYHMGAA PIFVDISTVS
LGLSPQAVQT YLEEYGLLNE EGLCIHKETK QTIKAVMPMH TFGHPVELDE LVLICQQWNL
VLIEDAAESL GSRYKEKHTG TIGEFAALSF NGNKIITTGG GGVLLTNNQA NGIRAKHITT
TAKVPHPYEF YHDEAGFNYR MPNLNAALGC AQMESLPLFI EQKRALAMHY NSFFDGGELL
FVQEPSYAKS NYWLNAVICP NLHSRDKLLK LTNDSGVMTR PVWQLMHRLP MFKDALRGSL
QHSEWFEERL VNLPSSPINT RI
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