Gene Swoo_1585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1585 
Symbol 
ID6115825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1975315 
End bp1976145 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content36% 
IMG OID641633067 
Producthypothetical protein 
Protein accessionYP_001759966 
Protein GI170725940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.979061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTC TTGATGAAAT TTCATTTATT GATATAGAGA ATACTTCACA GTTACTAATG 
CACTATGATG GTATTGCAGC ACTTTTTCTT GAATCCTTTG ATAAGGAGCT AAATTGCGAT
TTATGGAAGT GGGCTTATCT TGATAACCCC TTTGGTGAGC CATTAGTATC CATTGCAATT
CATGATAATA AAATAATTGG ACACTATGCA GTCATACCCA TGAACCTTGA AAACAGTTCG
AGCTCTATGC TCGGATTTTT ATCGATGACA ACTATGGTCG CTGTAGATTA TAGAAAGCAT
AGACTTTTTC AGCTACTCGC TGAGCGAGTT TATAAAAAAA TAGAGAGCTT AAATGAACCC
GCCATTGTTT TTGGCTTCCC CAATGACAAC TCCGTACCAG GTTTCAAAAA ACGTTTAGGT
TGGACAGTTT CAGAAGAATA CAAGGTCATC ACCTTGCAAG CTGATATGAT TGATTTAGCT
GTAATACAAC TAAATCAACA CATAGATTCG AGTAGTTTTA CTCTAAACCT TAGTCAAGAA
AAAGTTTGTA ACTGGAGAAC AAGTAAGCCA AATCAAACAT GGAGTTACGA TAAAAACATT
GGACTCAAAG CATTGGATGA TGGATTTGAT GTCATGCACC TCTCGACGGC TCCATCTTTA
AATTTAGCCA AATCGATGAG CTCTATCAAT TTAATTTTAC CTGTTTCAGA GGAGTTTTTG
GCTAATTCCG GTTGCGAAGT CGCTTTTGCA TACCGATTTG GTTACAGGAC TTTTAACACA
AGTTCAGAGC CAAAAATATT TGTACAAATG TCAATGTCGG ATATCTTTTA G
 
Protein sequence
MNILDEISFI DIENTSQLLM HYDGIAALFL ESFDKELNCD LWKWAYLDNP FGEPLVSIAI 
HDNKIIGHYA VIPMNLENSS SSMLGFLSMT TMVAVDYRKH RLFQLLAERV YKKIESLNEP
AIVFGFPNDN SVPGFKKRLG WTVSEEYKVI TLQADMIDLA VIQLNQHIDS SSFTLNLSQE
KVCNWRTSKP NQTWSYDKNI GLKALDDGFD VMHLSTAPSL NLAKSMSSIN LILPVSEEFL
ANSGCEVAFA YRFGYRTFNT SSEPKIFVQM SMSDIF