| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1583 |
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| Symbol | |
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| ID | 6115823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1973491 |
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| End bp | 1974168 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641633065 |
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| Product | LmbE family protein |
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| Protein accession | YP_001759964 |
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| Protein GI | 170725938 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.383068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACTA AAAAGGTACT TGTTATTGCT CCACATGCTG ATGACGAGTC ATTAGGTTGC
GGTGGGACCA TTCTAAAACA TATCGACATA GGCGATGAGG TGCATTGGTT GATTGTCACA
GGTATGTCTC TCGATTCAGG CTTCAGCGAG GAGCAAATTA ACATAAGGAA AGATGAAATA
GCCAAAGTTG GACTTCTGTA TAAATTTAAA CAGGTTCATG AACTTTTTCT TCCACCCGCA
TCGTTAGACT GTTTGCCAAA AAAGAACATC ATTTCAGCTA TCTCTTCAGT TATTCAAAGC
GTGGAGCCTG AACTGATCTA CACAGCGTAT AGAAATGACG CCCACAGTGA TCACGAAGTT
GTTTTTGATG CCATCACGGC TTCTTCTAAA ACCTTTCGAT ATCCATCGAT AAAGCGGATA
TTAGCTTACG AAACTCTATC AGAAACAGAC TTTGGACTTA AACCTGAAGA TGGAGGCTTT
AAACCTAATG TCTTTGTCGA TATCTCAGAT TTTTTAGAGC AAAAACTAAA TATTCTCGAT
CATTTTGAAT CTGAGATGAG TCACTTTCCC TTTCCTAGAA GTCGAAAAGC AATCTCATCC
TTAAGCTTTG TTAGAGGAGT ACAGGCTGGT TGTGAATCAG CCGAAGCGTT TATGTTACTG
AAGGAGATTA TTAGGTGA
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| Protein sequence | MKTKKVLVIA PHADDESLGC GGTILKHIDI GDEVHWLIVT GMSLDSGFSE EQINIRKDEI
AKVGLLYKFK QVHELFLPPA SLDCLPKKNI ISAISSVIQS VEPELIYTAY RNDAHSDHEV
VFDAITASSK TFRYPSIKRI LAYETLSETD FGLKPEDGGF KPNVFVDISD FLEQKLNILD
HFESEMSHFP FPRSRKAISS LSFVRGVQAG CESAEAFMLL KEIIR
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