Gene Swoo_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1573 
Symbol 
ID6115813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1963865 
End bp1964434 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID641633055 
Producthypothetical protein 
Protein accessionYP_001759954 
Protein GI170725928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.36812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCA CCCACTCTAT CACTAAGCTA AGCCTGATTG GCTCACTACT ATTCGCTTCG 
AGTACTTCGG CAATGGAGAT CTCCGGCGTT CAGCTACCTG AGCAGATAAC CCTTGCTCAC
ACTGAGTTGC AACTCAATGG CGCAGGTGTT CGCAGTAAAT TTTTTATTGA TCTCTATGTT
GGCAGTTTAT ACCTAACAGC TGCCAACTCA GATCCCGCCC AAATTATCGA TGCAGATCAA
TCGGCCATTC GCCTAAATAT CACATCAGGT ATGATCACAG CTGACAAAAT GCGCGATGCC
ATTACTGAAG GTTTCGATGA TGCAACTGAG GGGAAAACTG CTGCGATCCA GTCTCAAATA
GATGCCTTTA TGGCACTGTT TAGTGAAGAG ATTAAAGAGG GAGACCAGTT TACTCTCGCC
ACCAGCAAAG CATCTGGTGT CACAGCTTAT AAAAACAATA TTGCCCAAGC CACTATTGAA
GGTGAAGCAT TCAGGCAAGC ATTATTGAAA ATTTGGTTAG GTGATGAGCC AGCTCAAAGC
AGCTTGAAAA AAGCGATGTT AGGCAAGTAA
 
Protein sequence
MSLTHSITKL SLIGSLLFAS STSAMEISGV QLPEQITLAH TELQLNGAGV RSKFFIDLYV 
GSLYLTAANS DPAQIIDADQ SAIRLNITSG MITADKMRDA ITEGFDDATE GKTAAIQSQI
DAFMALFSEE IKEGDQFTLA TSKASGVTAY KNNIAQATIE GEAFRQALLK IWLGDEPAQS
SLKKAMLGK