Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1547 |
Symbol | |
ID | 6115787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1925360 |
End bp | 1926547 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641633031 |
Product | outer membrane protein assembly complex subunit YfgL |
Protein accession | YP_001759930 |
Protein GI | 170725904 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00611389 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTT GGTGCAAAAC ATTGCTCGCA TGTGGATTGA GCTTAGGTCT GTTATCAGCC TGTTCATCCA GTGACGTAGA AGAGGAGCCG GTGAGCCCTT TGCCTGAAAT CGAGGCAAGT GTCTTTCCAA CAGTAAGCTG GAGTGCTTCG GTTGGTAATG GTGTGGGACC TTATTACTCC CGCCTACGCC CAGCTGCACG ATATGACAAA CTGTATGTTG CCGATCGTTA CGGTCAGGTG GTTGCATTTG ATGAAGCCAC TGGTGAAAGA GCGTGGGAGA GAGACTTCAG CTCAGCTTTT AAAGATAATA TCTTAGCCAA AAATAAAGGG GCTAAACTTG CAGCTGGCGT TACCGCTGCT CGCGACAAGG TCTTTATCGG TGGCGAAAGT GGTCTACTTG GTGCACTCGA TGCTGAAACC GGTGAAACCG AATGGTCGGT TGTTACTGGT GGTGAGCTAT TATCTGCGCC AACTGTTGCC GAAGATATTG TTGTGGTCAA TACCAGTGCT GGAACGCTCG AGGCATACAG CGTTGAAGAT GGTGAGCAGC AGTGGATCTA TGAGTCAAAG CTGCCAACAT TAACCTTACG CGGTACAGGT TCTGCAAACT ATGAAGCGGG TGGTTTCTTT GTGGGAACTG CCGATGGTAA AATAGCCGTT GTGATTAAGA ACAATGGTCA GGCTGCATGG GAGCAAGCGA TTTATACGCC AAAAGGCGGT AATGAGTTTA CCCGTATGGC CGATGTCGAT ATGATGCCGC TCATTATTGG TGAAAACCTA TACGCAGTGA GTTTTAACGG TAATCTCGTA TCGATGGAGC TAAGATCTGG TCGTGTTGTC TGGACCCGTA AATATTCAAG TTTCCATGAG TTAGCCGATT CGGGTGTTAA CCTGTTTTTG GTTGACGATC ATAGTCGCAT CTACGCAGTA GATAGACGTA ATGGTCTGGA GAACTGGAGC AATACTGAGC TGGCAAATCG TGACTTAACG TCTGCAGCCG TGTTCAAAGA CTACATCGTA GTGGGTGATT TTGAAGGGTA CCTTCACTTT ATCGACAAGA GTAATGGTAA TATTGTTGGC CGTGTAGAGG TCGACAGTTC AGGCTTATTT AGCCAACCTC TGGTTGTAGG TGATAACATA TACGTTCAAA CACGAAATGG TAAAGTTGCT AGAATAACGC TCCCATAA
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Protein sequence | MKSWCKTLLA CGLSLGLLSA CSSSDVEEEP VSPLPEIEAS VFPTVSWSAS VGNGVGPYYS RLRPAARYDK LYVADRYGQV VAFDEATGER AWERDFSSAF KDNILAKNKG AKLAAGVTAA RDKVFIGGES GLLGALDAET GETEWSVVTG GELLSAPTVA EDIVVVNTSA GTLEAYSVED GEQQWIYESK LPTLTLRGTG SANYEAGGFF VGTADGKIAV VIKNNGQAAW EQAIYTPKGG NEFTRMADVD MMPLIIGENL YAVSFNGNLV SMELRSGRVV WTRKYSSFHE LADSGVNLFL VDDHSRIYAV DRRNGLENWS NTELANRDLT SAAVFKDYIV VGDFEGYLHF IDKSNGNIVG RVEVDSSGLF SQPLVVGDNI YVQTRNGKVA RITLP
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