| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1545 |
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| Symbol | hisS |
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| ID | 6115785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1923442 |
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| End bp | 1924716 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633029 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001759928 |
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| Protein GI | 170725902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000365747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC AATTCGCGGA ATGAATGATA TTCTGCCTAC CCAAAGTCCT
CTATGGCAAA AACTAGAAAC TGTATTAAGA GAGACTGTTG CCGCCTACGG TTACAGCGAG
ATCCGTACGC CTATCGTTGA GAGTACCGAC CTTTTTAAAC GCTCAATCGG TGAAGTCACT
GATATCGTAG AAAAAGAGAT GTACACCTTT GATGACCGTA ACGGTGACAG CTTAACACTT
CGCCCAGAGG GAACAGCGTC AACGGTACGT GCCGGCAATG AGCATGGTTT GCTCTATAAC
CAAGAGCAAC GTCTTTGGTA TATGGGCCCT ATGTTTAGAC ACGAGCGCCC ACAGAAAGGT
CGCTACCGTC AATTTAATCA GTTTGGTGTT GAAGTTTATG GCATCGGCAC TGCCGACGTC
GACGCCGAAG TCCTGATGCT TTCTGCCCGT TTATGGGAAA AGCTTGGCAT TAAAGAGCAT
GTCACACTTG AGTTGAACAC CTTAGGTGAC CCAGCTGAGC GTGCCACATA CCGCAGCGCC
CTTATCGAGT TCTTAGAGCA GTTTAAAGAG CAACTTGATG AAGAGAGCCA ACGTCGCATG
TACACCAACC CACTGCGTGT TTTAGACACC AAGAACCCTG AAGTTCAGGC GTTATTGGTC
GATGCACCTG AGTTGATGGA CTTCCTCGGT GAAGAGTCAC GAGCACATTT TTCACATTTA
TGTGAACTCT TAGACGCTGT TGGTATCCAA TACGTCATCA ACCCTCGCTT AGTGCGTGGT
TTAGATTACT ATAATCGTAC TGTTTTTGAG TGGGTTACCT CTAGTTTAGG TTCACAAGGA
ACCGTACTTG CAGGTGGACG CTATGATGGA TTAGTTGAGC AACTCGGTGG TAAAGATACA
CCTGCTGTTG GTTTTGCTAT GGGATTAGAG CGTATCGTTT TACTGCTTGA AACATTAGAG
TTAACCAGTG ATATCCCTTC AACTGTCGAT GTTTATGTGA CTGCGATGGG CGATACAAGT
AAGATTGAAG CGATAAAAAT TGCTCAAACC TTAAGAAGTG AGTTGCCTAA CCTTAGGGTT
ATGAGTCATT GTGGCGGCGG TAACTTCAAG AAACAGATGA AGCGCGCGGA TAAAAGTGGT
GCCCAGATCG CACTGGTTAT AGGTGAAGAT GAACTTGCCA ATAACCAAGT TGCAGTCAAG
TATCTCCGCG AGAAAAAAGA ACAAGAATTA GTTGCACGTG ATGGATTAGC AACTTATATC
GCCAAGCAGA TTTAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKLETVLR ETVAAYGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF DDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFNQFGV EVYGIGTADV DAEVLMLSAR LWEKLGIKEH VTLELNTLGD PAERATYRSA
LIEFLEQFKE QLDEESQRRM YTNPLRVLDT KNPEVQALLV DAPELMDFLG EESRAHFSHL
CELLDAVGIQ YVINPRLVRG LDYYNRTVFE WVTSSLGSQG TVLAGGRYDG LVEQLGGKDT
PAVGFAMGLE RIVLLLETLE LTSDIPSTVD VYVTAMGDTS KIEAIKIAQT LRSELPNLRV
MSHCGGGNFK KQMKRADKSG AQIALVIGED ELANNQVAVK YLREKKEQEL VARDGLATYI
AKQI
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