| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1542 |
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| Symbol | |
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| ID | 6115782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1920262 |
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| End bp | 1921050 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633026 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_001759925 |
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| Protein GI | 170725899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.364125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCACG GACTGCCCCA AAAAATCGCA CTTACCATAC TTCTTTCGAG TATGTTGAGT
GCCTGCGTGT CACAAAGTAC TTATACTGGA ACCGACGTTC CTGTGACCGA AAGGGAGTTC
GACAATGTCT TGGCCGCGCA GAAGCGTGCA CAACTCGGGT TAACCTACCT GCGCAAAGGT
AACAGCCAGC AAGCTAAGTA CAATTTAGAT AAAGCTGTTG AGTTTGCCCC GAATATTCAA
GATGTACACA TATCAATGGC TTACTACTAT CAAACAGTCG GTGAGCTTGA AAATGCCGAA
GACTCCTACC GTAAAGCCAT TAATGCGAGA GACGCCAGTG GCGACGGGTT AAACAATTTC
GGTGTGTTTC TTTGTCAACA AGAGAAATAC AAAGAGTCTG AGAAGATGTT CCTTAGAGCG
GTCAAAATGC CCAGTTATAC TCGCTCAGGG GACAGCTATG AAAATTTAGG GATCTGTAGT
CGTAAGGCTG GAGAGATAGA GAAAGCGCGT AAATACTTCA GTACCGCACT TAGATACAAT
CCCAGAAGTG GAAGCACTCT ACTTGAATTA ACAGAGATCG AGATTGAGGA ACATAACTAT
CTCGATGCAC GTGCGCAACT TGCACGCTAC CATCGTGTCA TCGCCCAATC TGCCGAAAGT
TTGACCTTAG GAGTTGAGAT TGAGCGGGGC TTAAACGATG AAGAGGCCGC CAGAGAGTTT
GGCATATTAC TTTTAGCTAA GTTTCCCTCA TCTATTGAGG CTAAGCGATA TCGAGCCAGT
ATGCACTGA
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| Protein sequence | MKHGLPQKIA LTILLSSMLS ACVSQSTYTG TDVPVTEREF DNVLAAQKRA QLGLTYLRKG
NSQQAKYNLD KAVEFAPNIQ DVHISMAYYY QTVGELENAE DSYRKAINAR DASGDGLNNF
GVFLCQQEKY KESEKMFLRA VKMPSYTRSG DSYENLGICS RKAGEIEKAR KYFSTALRYN
PRSGSTLLEL TEIEIEEHNY LDARAQLARY HRVIAQSAES LTLGVEIERG LNDEEAAREF
GILLLAKFPS SIEAKRYRAS MH
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