| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1541 |
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| Symbol | |
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| ID | 6115781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1919107 |
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| End bp | 1920228 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633025 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_001759924 |
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| Protein GI | 170725898 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.865101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.656047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA AGAAAATCAA TTTATTGGAT CTTGACCGTA AAGGGTTAAG AGCATTATTC
ACTGAAATGG GTGAGAAGCC GTTTCGTGCC GATCAATTGA TGAAGTGGAT TTATCATTTT
GGCGTCAGTG ACTTTGACGA GATGAATAAT ATTAACAAAG CGCTGCGTGC GAAGCTTAAT
GCCCGCTGTG AGATTGTTGC GCCTGAAATT TCCAGCTTTC AAAAGTCTGA AGATGGCACC
ATTAAGTTTG CTATTAATGT TGGTCAAGGC CAGGAAGTTG AAACCGTTTA CATTCCAGAA
GATGACAGAG CAACCTTGTG TGTTTCATCA CAAGTGGGTT GTGCTTTAGA GTGCACCTTC
TGCTCGACTG CTCAGCAGGG CTTTAATCGT AACTTAACGG TTTCTGAAAT TATTGGTCAA
GTTTGGCGTG TTGCGGACTT TATCGGTTTT GTGAAAGAGA CTGGCGAACG TCCTATTACT
AACGTCGTTA TGATGGGAAT GGGTGAGCCA CTACTGAACC TAAAGAACGT GATCCCTGCA
ATGGATATCA TGTTAGATGA TTTTGGTTTC AGCCTCTCTA AGCGCCGAGT GACGGTATCA
ACTTCAGGGG TTGTACCAGC ATTGGATAAG TTAGGTGATG CTTTAGATGT TGCTTTGGCG
GTAAGTATTC ATGCTCCTAA TGACGAACTG CGTGACGTGT TGGTTCCAGT CAATAAAAAG
TATCCTTTAG AGGAGTTTTT AGGTGGGATC CGCCGTTATA TTGCTAAGTC GAACGCTAAC
CGAGGACGTG TAACTGTTGA GTATGTCATG TTAGATCATA TCAATGACAG CACAGACCAA
GCCCATGAAT TAGCTAAATT AATGAAAGAT ACCCCCTGTA AGATTAACCT TATTCCGTTT
AATCCTTACC CTGGTTCACC TTATGGTCGC TCCTCTAATT CTCGTATCGA TCGTTTCTCC
AAAGTATTGA TGGAGTACGG TCTAACAGTG ATTGTTCGCA AGACTCGTGG TGACGATATT
GATGCTGCTT GTGGTCAATT GGCCGGTGAT ATCAGAGACA GAACTAAGCG TTTAGCGAAA
AAACGCATGC AAGATAGCCA AATATCGGTC ACAATAAACT AA
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| Protein sequence | MSEKKINLLD LDRKGLRALF TEMGEKPFRA DQLMKWIYHF GVSDFDEMNN INKALRAKLN
ARCEIVAPEI SSFQKSEDGT IKFAINVGQG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVSEIIGQ VWRVADFIGF VKETGERPIT NVVMMGMGEP LLNLKNVIPA
MDIMLDDFGF SLSKRRVTVS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDVLVPVNKK
YPLEEFLGGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKINLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQDSQISV TIN
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