Gene Swoo_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1538 
Symbol 
ID6115778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1915331 
End bp1915843 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID641633022 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001759921 
Protein GI170725895 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.268239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCAGC GATCCATGTT TTCAGTCATT GCCTACCAAG CAGGCTACGC AACTAGCGTG 
AGCCAACTTT TTCACGATGC AATTCATGCT ATCGATGAGG TGCATTACTC ATTTGAGGAT
AAATCTGCTT GGTCATCAAA GCCGAGATCG GCCTATCACT GGCATAAGCG AATGAGTCGC
TCAAAAGCTT GGCTTATGAT TGATAAGAGC ATGCTCATAG ATGGCCAGCC TAAGTGCTGT
GGATTTATCA ATATTGAGAC AGGGTTTTAT ACTCAAGGCT ATATCGATAG TTTATATGTT
CATCCTGCCT ATCAGGGGAA GGGGATTGCT AAAGCCCTGT ATCAAACTCT TGAACAGTGG
GGCGTAGAGC AAGGCTATCG AGAGTTGATG GTTGATGCTT CTAGCCTCTC CAAAGCTATG
TTTCTGTCAC AAGGCTTTAA GCTGTGTCAC CGAAGCTATC AGGAGAAACG TGGTCGTGTG
ATCATGGGGT ACTTGATGAA GAAGCAGCTT TAG
 
Protein sequence
MCQRSMFSVI AYQAGYATSV SQLFHDAIHA IDEVHYSFED KSAWSSKPRS AYHWHKRMSR 
SKAWLMIDKS MLIDGQPKCC GFINIETGFY TQGYIDSLYV HPAYQGKGIA KALYQTLEQW
GVEQGYRELM VDASSLSKAM FLSQGFKLCH RSYQEKRGRV IMGYLMKKQL