Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1538 |
Symbol | |
ID | 6115778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1915331 |
End bp | 1915843 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633022 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001759921 |
Protein GI | 170725895 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.268239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCAGC GATCCATGTT TTCAGTCATT GCCTACCAAG CAGGCTACGC AACTAGCGTG AGCCAACTTT TTCACGATGC AATTCATGCT ATCGATGAGG TGCATTACTC ATTTGAGGAT AAATCTGCTT GGTCATCAAA GCCGAGATCG GCCTATCACT GGCATAAGCG AATGAGTCGC TCAAAAGCTT GGCTTATGAT TGATAAGAGC ATGCTCATAG ATGGCCAGCC TAAGTGCTGT GGATTTATCA ATATTGAGAC AGGGTTTTAT ACTCAAGGCT ATATCGATAG TTTATATGTT CATCCTGCCT ATCAGGGGAA GGGGATTGCT AAAGCCCTGT ATCAAACTCT TGAACAGTGG GGCGTAGAGC AAGGCTATCG AGAGTTGATG GTTGATGCTT CTAGCCTCTC CAAAGCTATG TTTCTGTCAC AAGGCTTTAA GCTGTGTCAC CGAAGCTATC AGGAGAAACG TGGTCGTGTG ATCATGGGGT ACTTGATGAA GAAGCAGCTT TAG
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Protein sequence | MCQRSMFSVI AYQAGYATSV SQLFHDAIHA IDEVHYSFED KSAWSSKPRS AYHWHKRMSR SKAWLMIDKS MLIDGQPKCC GFINIETGFY TQGYIDSLYV HPAYQGKGIA KALYQTLEQW GVEQGYRELM VDASSLSKAM FLSQGFKLCH RSYQEKRGRV IMGYLMKKQL
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