| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1533 |
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| Symbol | |
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| ID | 6115773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1911293 |
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| End bp | 1912729 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633017 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001759916 |
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| Protein GI | 170725890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.219593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTAAGA TGTTAAACAA TTTTTTTATC TTTGTATCAT TTCTTTACAT CCTGGAGAGT
CATGCGCAAT TTTCACTCGA ACAGATCCCC GAAATAGAGA ATAAAAAAGC GATCACTTTA
GTCGCAGAAA CTGGATTTTG GACAGTACAT TTAAAAGAGA AGATGCTCCC TAAATTTACG
GCTCAAACAG GGATAAAAGT TAATGTCATC ACCACCTCTT TGGATCAGAT GTATACTCTT
CAAACTGAGT CTTTAATCCA AGGAGCAGGT AAGTATGATC TGCTGACTAT GGAAGCGGGT
TGGGCAAAAG AGTGGGCATC GAAAGGATTA ACAGTGCCTC TATCGGAACT TGCATCCCTC
TATGATCCCA GTGGTGAAAG GGGCATAAAC AGCTATCTTG AGCCATATTA CTCATCACTA
CTCAATATCC TCTCCTACCA AGGTGAGATC CATGCCATAC CCTACAACAA CTATGTGATG
GGCAACCATT ACAGAGCCGA TCTATTTGAG CATCCTAAAG AGAAGTTTAA TTTCCAAGCT
AAATATGGCT ATACACTGGC TCCTCCCAGT AGCATTCAAG AGTTAAAAGA TATCAGCGCT
TTTTTCACTA GAGAAGCAGG TGAGAACCTA GGCAGTAACA TACTAAAGAA ACCCTTTTAT
GGCTTGGCAT TAATGTCAGG AAACCGTCCC CATATTAACG ATGAATTCTC CTCCATCCTA
TGGAGCCTCA ATGGTTACTG GATGAAACCA GAATACAATG GTAAAGAGAA GATAAAGCTC
TTCCAACTCC CCCGAGAGAA TGCGACACTT ATTCGCACAG CTAACATTTA CCGAGATCTA
ATGCGTCATG CTTTTCCCGC CCATAAGCAG TTTGCCTTTA AGGAAGCTGC AAACACATTA
GCCAACGGTG ACGTTGCCAT GTGGCCTTTC GCTTATAACA ATCTTTGGAG CGCCTCTTTT
CAAGTTGAAT CAAATATACC AGGAGCCAAG CTTGGCATTG CACAAGTCCC TGGTGGTAAG
CCCTACAATG GTGCCTATGC CTTTGCTGTT GCCTATGATA GCGTCAATCC CCAAGCAGCC
TATTGGTTAC TGAAATATAT GGGGTCCTTT GAAGCGCAAT ATGCCTACGC GCTTGGCGGG
GGAAATCCTT GCCGAATTGA TGTTGCAACC GCACCAGAGT TTCAAACAGA AGAGTTACGG
CACATAGGTG GCGCGTTTAA CGTCAGCCAT AACGCCAATA TTAATTGGTC AGACGAGGTC
CTTAAATTGG GCCACTTCAC CAGTACTGCA ATGGGAGATA TCTATCCGGA ACTGGCAAAA
AGCTGCTTTC AGCTGTCTAA CAGTAACGAG GATATAGAAT CTGTAACCTC TCAGTTGATT
AACAAAATTG AGCAGATCCA AAATCGCTCC GGTGAAGTGC CAGTGGTAAG AAGATGA
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| Protein sequence | MPKMLNNFFI FVSFLYILES HAQFSLEQIP EIENKKAITL VAETGFWTVH LKEKMLPKFT
AQTGIKVNVI TTSLDQMYTL QTESLIQGAG KYDLLTMEAG WAKEWASKGL TVPLSELASL
YDPSGERGIN SYLEPYYSSL LNILSYQGEI HAIPYNNYVM GNHYRADLFE HPKEKFNFQA
KYGYTLAPPS SIQELKDISA FFTREAGENL GSNILKKPFY GLALMSGNRP HINDEFSSIL
WSLNGYWMKP EYNGKEKIKL FQLPRENATL IRTANIYRDL MRHAFPAHKQ FAFKEAANTL
ANGDVAMWPF AYNNLWSASF QVESNIPGAK LGIAQVPGGK PYNGAYAFAV AYDSVNPQAA
YWLLKYMGSF EAQYAYALGG GNPCRIDVAT APEFQTEELR HIGGAFNVSH NANINWSDEV
LKLGHFTSTA MGDIYPELAK SCFQLSNSNE DIESVTSQLI NKIEQIQNRS GEVPVVRR
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