Gene Swoo_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1530 
Symbol 
ID6115770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1908107 
End bp1908595 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content43% 
IMG OID641633014 
Producthypothetical protein 
Protein accessionYP_001759913 
Protein GI170725887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0510637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTA ACTTTAAACT GAGCGCACTA AAACCGTTCA TTTCAGCACT ACTCATCATT 
GCAGCATCAA TTAACACGGC AGCGTTTGCC AAATCAACAG ATCATAATGC TGAGCAGGTG
CTGGATAAAC TGCATCAAGC AGCAAGTGAT GGTGACTGGG ATTGTTATTT CTCGCTTTAC
CTTCCTGATG CTATCTTCAT CGGCACCGAT GCCAATGAGC ATTGGACAAT GGAGAAGTTT
CAGCAATACG CTCGCCCAAC TAAAGGCTGG ACCTACACAC TCAAAAGTAG AAAATTAAAC
ACGATGCAAA AGCTGGATAA GGTCATTGTT TTTGATGAGC TTCTAGACAG CCAATCCTAC
GGTGTAAGTC GAGGAACTGG CACTTTGGTC TTAACTGATA TGGGCTGGAA AGTGGCTCAG
TACCACCTAA GTTTTCCTAT TCCCAATGCG ATAGCAAAAG AGATAACAGC CACTATCAAA
TTACAATGA
 
Protein sequence
MRANFKLSAL KPFISALLII AASINTAAFA KSTDHNAEQV LDKLHQAASD GDWDCYFSLY 
LPDAIFIGTD ANEHWTMEKF QQYARPTKGW TYTLKSRKLN TMQKLDKVIV FDELLDSQSY
GVSRGTGTLV LTDMGWKVAQ YHLSFPIPNA IAKEITATIK LQ