| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1520 |
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| Symbol | smpB |
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| ID | 6115760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1896349 |
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| End bp | 1896843 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633004 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001759903 |
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| Protein GI | 170725877 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0417834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000500018 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGA AAAATGCAAA AAAATCAAAA AACTCCTCCG CATCTATCGC ACGTAATAAA
CGCGCGACAT TCGACTACAA GTTCGAAGAG AAGATGGAAG CAGGTCTATC CCTAATGGGA
TGGGAAGTTA AGTCTATTCG TATGGGCAAG GTCAACTTGT CTGAAAGCTA TGTATTTATG
AGAGAGGGCG AAGCCTTCCT TTTCGGATGT ACCATAGCCC CACTGAATAC CGCGTCCACC
CATGTTGTTT GTGATCCTAT GCGTTCACGC AAACTACTAC TCAAACGCAA AGAGTTAGAT
AAGCTACAAG GACTGGTTGA CCGTAAAGGC TACTCTATTG TCCCTATCTC GATGTATTGG
CAAAAAGGTG CATGGGTAAA AATAGAGATA GGTCTTGGTA AAGGTAAGAA AGAGCACGAT
AAGCGTGATG ATACCAAAGA CCGAGAGTGG CAGATCGAAA AAGCCCGAAC CATGAAAAAA
GCGGTTCAGC AGTAG
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| Protein sequence | MAKKNAKKSK NSSASIARNK RATFDYKFEE KMEAGLSLMG WEVKSIRMGK VNLSESYVFM
REGEAFLFGC TIAPLNTAST HVVCDPMRSR KLLLKRKELD KLQGLVDRKG YSIVPISMYW
QKGAWVKIEI GLGKGKKEHD KRDDTKDREW QIEKARTMKK AVQQ
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