Gene Swoo_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1501 
Symbol 
ID6115740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1873311 
End bp1873883 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID641632985 
Producthypothetical protein 
Protein accessionYP_001759884 
Protein GI170725858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACT ATCAACGAGC CCCAGAACTC CATGTTTCTG AGTGGCTCAA CACACCAGAG 
CCCATCACAT TGGCTCAATT AAAGGGAGAG GTTGTGGTAT TACACGCCTT TCAGATGTTA
TGTCCAACTT GTGTAAGCCA CGGTTTACCT CAAGCACAGG CATTGCATAA GCTATTTGCC
GATGAAAAAG TTAACATTTT GGGGCTGCAT ACGGTTTTTG AACATCATCA GGTCATGGAT
AAAGCTGCTC TTAAGGTATT TATCAGTGAA TACCGACTCA GTTTTCCTAT CGGCATCGAC
ACACCATCGA CTCAAGGTGT GATCCCAAAG ACAATGCAGG AATATATGCT AAGAGGCACT
CCCTCTATTA TCGTCATCGA TAAACAGGGG CAGATCAGGC TAAGCCATTT TGGCCATATT
CCAGACTTGG CTCTTGGCAA GATAGTGGGT CAACTTGTTG CAGAGCCATT TGAAACAGAT
AAGCACACCT CCCCCTCAAA GGATACTGAT ATTTTCAAGC CTCAAGAGGA GAGAGCAGAG
AAAGGTTGTG ATCAAACAGG CTGCTCAATT TAA
 
Protein sequence
MTHYQRAPEL HVSEWLNTPE PITLAQLKGE VVVLHAFQML CPTCVSHGLP QAQALHKLFA 
DEKVNILGLH TVFEHHQVMD KAALKVFISE YRLSFPIGID TPSTQGVIPK TMQEYMLRGT
PSIIVIDKQG QIRLSHFGHI PDLALGKIVG QLVAEPFETD KHTSPSKDTD IFKPQEERAE
KGCDQTGCSI