| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1451 |
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| Symbol | |
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| ID | 6115690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1832139 |
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| End bp | 1833383 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641632937 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001759836 |
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| Protein GI | 170725810 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCCC AAGTATTAGA ACCACAACTG CTCGAGATTA AAGATTTTGT CTCTTTCACT
TTAGCTATCA TCGCACTATT CATCGGTAAA GCCATTATCT CTCGCTATGA GTTATTGCGA
AAGTACAGTA TTCCAGAGCC CGTCGTTGGT GGTTTTGCTT GTGCATCTAT TGTCGGCATT
CTCTATTATG GATTTGATCT TCAAATAGAG TTTAATTTGG ATGTAAGAGA TATTTTGCTT
CTGTATTTCT TTGCTGGAAT AGGATTGAAA GCTGATTTTG CCACCTTAAT TAAAGGTGGC
AAACCCTTAC TTATTTTAAT CACATTGTCG ACGCTGTTTA TCTTTATGCA AAACTTTATG
GGGGTCAGCG TTGCATCCCT ATTTGGATTA GATCCTAAAG CCGGTTTAAT GTCGGGCTCT
ATTTCGTTGA TTGGTGGCGT GGGTACGGCA ATGGCTTGGA CGCCTACGTT TGTGGAAGAG
CTGGGTATCG CTAATGCAAA TGAGCTTGGG ATTGCATCAA ATACATTAGG GTTAATTTCT
GCTTGTGTGA TTGGTGGACC TATCGCTGCA TACTTGATGA AACGTCATCA TATTAAGGCT
AATCAAGATG ACAGTTTAGA TATCGGTGCG AGCCATAAAA CTAGCTCTCA GCATATCAGA
GTGGACTATT TTGGTGTGTT AAGAGCTTGG CTCTGGCTAA ATGTGACCTT GATTATTGGT
TATTTCATCG ATATTGCATT GCAGGAGTTA GGGCTTAAAC TGCCCATGTT TGTGGCGTGT
TTGTTGGCTG GTATTATCAT AGGCAATAGT GGGCGAGCTC TGCTTAATCG AAGCAAAGAT
AAAGGAGAGG CTTACCTTAA AGATGCTTCT CAAGGACTTT CTTTAATTCA AGATATCTGT
CTAGGCATGT TTTTAACCAT GGCATTGATG AGCCTGAAAA TATGGGAGCT TGAAGGTAGT
CTGTTTTATA TATCAGTGGT AATGAGCTTA CAGGTGCTGC TTTCGATTAT CTTTACTGTG
TTTATTGTCT TTAGAATGAT GGGCAAAGAT TATGAGGCTG CTGTTATCTG TTCGGGTTTT
GGTGGGGTAA CTTTGGGCTC GACGGCAACT GCGATTGTGA ATATGACTGC GGTTACTCAA
CAATATGGTG CAGCGCATAG AGCCTTTATT ATCGTACCTT TAGTCTGTGG TTTCTTTATC
GACATTATCA ATGCGATGAT CATTAACCTC TTTGCATACT TTTAA
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| Protein sequence | MDPQVLEPQL LEIKDFVSFT LAIIALFIGK AIISRYELLR KYSIPEPVVG GFACASIVGI
LYYGFDLQIE FNLDVRDILL LYFFAGIGLK ADFATLIKGG KPLLILITLS TLFIFMQNFM
GVSVASLFGL DPKAGLMSGS ISLIGGVGTA MAWTPTFVEE LGIANANELG IASNTLGLIS
ACVIGGPIAA YLMKRHHIKA NQDDSLDIGA SHKTSSQHIR VDYFGVLRAW LWLNVTLIIG
YFIDIALQEL GLKLPMFVAC LLAGIIIGNS GRALLNRSKD KGEAYLKDAS QGLSLIQDIC
LGMFLTMALM SLKIWELEGS LFYISVVMSL QVLLSIIFTV FIVFRMMGKD YEAAVICSGF
GGVTLGSTAT AIVNMTAVTQ QYGAAHRAFI IVPLVCGFFI DIINAMIINL FAYF
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