Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1441 |
Symbol | |
ID | 6115681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1822816 |
End bp | 1824750 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632929 |
Product | potassium efflux system protein |
Protein accession | YP_001759828 |
Protein GI | 170725802 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTT ACTTTATTCA AGCCTTTATC TACCTTTGCG CTGCGGTTAT TGCCGTGCCT TTGGCTAAAC GACTCGGGCT TGGCTCAGTG CTAGGCTATC TGATCGCAGG GGTCATAATT GGACCTGTTA TCGGACTGGT TGGCAGTGAA ACGAATACGC TGCAACACTT TGCAGAATTT GGTGTCGTGA TGATGCTATT TCTCGTTGGT CTCGAACTTG AGCCTAGAAT GCTCTGGGAT ATGCGTAATA AACTTATCGG ACTCGGCGGT CTGCAGATAG GACTCACAAC ATTAGTGATC ACCGCAGGTG GGCTCTATTT TGGACTCGTA TGGAGTGTCG CACTCACCGT CGGCCTTATC TTTGCGCTCT CATCGACAGC CATTGTGTTA CAGACCTTTA GTGAGAAAGA TCTCTCAAAA ACCGAAGGCG GTAAAAATGC TTTTTCGGTA CTACTGTTTC AAGATATCGC TGTTATCCCT ATGCTGGCGC TTATCCCACT ACTGGCGCTG CCTGAGCTGA TAGAAAAAGC GCAATCCATC GCGGGTCAAG CCGCTGAACA TCATGAAGAA CTCTCCTTAG TGGCAGGACT TCCCGGCTGG GCTTACGGGA TCGTATTACT ACTTTCTATC GCCATCGTTG TCGTCGGTGG TCACTACTTA AGTCGCCCTC TATTTCGCTA TGTGGCTAAT TCAGGGCTAC GAGAGATCTT CACTGCCACG GCGCTTATGC TAGTTATTGG CATCGCTGCA TTGATGAGCC TTGTGGGTCT ATCACCTGCG CTAGGAACTT TTCTCGCTGG AGTGGTGTTA GCCAACAGCG AGTTCCGCCA TGAACTTGAG TCCAATATTG AGCCCTTTAA AGGATTGTTA TTAGGACTGT TCTTTATCAC AGTAGGGGCT GGTATCGACT TTAATGTGTT GGCAAGCAAT ATCGGTCCAG TCCTTGGGTT AACTGCTGGC GTAATGCTCA TTAAAGCCTT AGTTTTATTT GCATTAGCCT TTATCTTTAA AATTAAGAAT AGCGACCGTT GGCTATTTGC CTTGAGCTTG GCCCAAGCAG GGGAATTTGG CTTCGTACTC CTTAGCTACA CAGTACAGAA CCACGTGATC CCAAGCGATC TTGCTCAGAT GTTATCTCTG GTCGTCGCAC TCTCTATGTT CCTCACCCCA GGCCTATTTA TCTTCTTCGA TAAGGTGATA TTGCCAAAAT ATGAGCATTC AGAAAATGAC AGAGAAGCCG ATGAGATAAC CGAAAAAGGC ACTGTTATTA TCGCTGGCAT CGGCCGCTTC GGTCAGTTGG TAAACCGTTT TTTACGGGCC AATAAGATTG ATACTGTGGT GCTAGATCAT CAAATATCTC AAGTCGAAAA CCTTAAAAAG ATCAATGTTA AAAGCTTTTA CGGCGATGCC ACTAGGCCAG ATCTTCTGCA CACTGCGGGC ATAGAAAACG CCGCTATGAT CGTTATTGCC ATCGACAATA ATGAACGCGC AGTTGAGCTA ACAAAGTATG TCAAGCATAC CTACCCTAAG GTCAAAATAT TTGCCCGAGC CTTCGACCGA GGTCATCACT TTGAACTCAA ACATGCAGGC GCCGATTTTA TTATCAGTGA GACCTATCAC TCGGCCTTAG AGTTAGGCAA GGAAGCATTG ATATCGATGG GCGTACACCC CTTTAAAGCT GAGCAGAAAA GGGCCACCCT TCGTGAACTC GAGCTTTGTT ATAAGGATTC TCTCTACGAA ATGTGGAAGG CAAATAGTGA AGACAGCAAG TACAGTACAC ACTTTAGAGA TCTGTTTATC GAGCTGGAAA CCGCCATCGC CAAAGCGATG AAGAGTGAAC GCTTTGATGA ACAAGCTAAG GTAGAGCGAG GCTGGACTCC ACCACCAAAA GGCTATGAGA AACAGTTTAA TGACTCAGAT GAGGGAGTCT CATGA
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Protein sequence | MTAYFIQAFI YLCAAVIAVP LAKRLGLGSV LGYLIAGVII GPVIGLVGSE TNTLQHFAEF GVVMMLFLVG LELEPRMLWD MRNKLIGLGG LQIGLTTLVI TAGGLYFGLV WSVALTVGLI FALSSTAIVL QTFSEKDLSK TEGGKNAFSV LLFQDIAVIP MLALIPLLAL PELIEKAQSI AGQAAEHHEE LSLVAGLPGW AYGIVLLLSI AIVVVGGHYL SRPLFRYVAN SGLREIFTAT ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIEPFKGLL LGLFFITVGA GIDFNVLASN IGPVLGLTAG VMLIKALVLF ALAFIFKIKN SDRWLFALSL AQAGEFGFVL LSYTVQNHVI PSDLAQMLSL VVALSMFLTP GLFIFFDKVI LPKYEHSEND READEITEKG TVIIAGIGRF GQLVNRFLRA NKIDTVVLDH QISQVENLKK INVKSFYGDA TRPDLLHTAG IENAAMIVIA IDNNERAVEL TKYVKHTYPK VKIFARAFDR GHHFELKHAG ADFIISETYH SALELGKEAL ISMGVHPFKA EQKRATLREL ELCYKDSLYE MWKANSEDSK YSTHFRDLFI ELETAIAKAM KSERFDEQAK VERGWTPPPK GYEKQFNDSD EGVS
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