Gene Swoo_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1441 
Symbol 
ID6115681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1822816 
End bp1824750 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content46% 
IMG OID641632929 
Productpotassium efflux system protein 
Protein accessionYP_001759828 
Protein GI170725802 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTT ACTTTATTCA AGCCTTTATC TACCTTTGCG CTGCGGTTAT TGCCGTGCCT 
TTGGCTAAAC GACTCGGGCT TGGCTCAGTG CTAGGCTATC TGATCGCAGG GGTCATAATT
GGACCTGTTA TCGGACTGGT TGGCAGTGAA ACGAATACGC TGCAACACTT TGCAGAATTT
GGTGTCGTGA TGATGCTATT TCTCGTTGGT CTCGAACTTG AGCCTAGAAT GCTCTGGGAT
ATGCGTAATA AACTTATCGG ACTCGGCGGT CTGCAGATAG GACTCACAAC ATTAGTGATC
ACCGCAGGTG GGCTCTATTT TGGACTCGTA TGGAGTGTCG CACTCACCGT CGGCCTTATC
TTTGCGCTCT CATCGACAGC CATTGTGTTA CAGACCTTTA GTGAGAAAGA TCTCTCAAAA
ACCGAAGGCG GTAAAAATGC TTTTTCGGTA CTACTGTTTC AAGATATCGC TGTTATCCCT
ATGCTGGCGC TTATCCCACT ACTGGCGCTG CCTGAGCTGA TAGAAAAAGC GCAATCCATC
GCGGGTCAAG CCGCTGAACA TCATGAAGAA CTCTCCTTAG TGGCAGGACT TCCCGGCTGG
GCTTACGGGA TCGTATTACT ACTTTCTATC GCCATCGTTG TCGTCGGTGG TCACTACTTA
AGTCGCCCTC TATTTCGCTA TGTGGCTAAT TCAGGGCTAC GAGAGATCTT CACTGCCACG
GCGCTTATGC TAGTTATTGG CATCGCTGCA TTGATGAGCC TTGTGGGTCT ATCACCTGCG
CTAGGAACTT TTCTCGCTGG AGTGGTGTTA GCCAACAGCG AGTTCCGCCA TGAACTTGAG
TCCAATATTG AGCCCTTTAA AGGATTGTTA TTAGGACTGT TCTTTATCAC AGTAGGGGCT
GGTATCGACT TTAATGTGTT GGCAAGCAAT ATCGGTCCAG TCCTTGGGTT AACTGCTGGC
GTAATGCTCA TTAAAGCCTT AGTTTTATTT GCATTAGCCT TTATCTTTAA AATTAAGAAT
AGCGACCGTT GGCTATTTGC CTTGAGCTTG GCCCAAGCAG GGGAATTTGG CTTCGTACTC
CTTAGCTACA CAGTACAGAA CCACGTGATC CCAAGCGATC TTGCTCAGAT GTTATCTCTG
GTCGTCGCAC TCTCTATGTT CCTCACCCCA GGCCTATTTA TCTTCTTCGA TAAGGTGATA
TTGCCAAAAT ATGAGCATTC AGAAAATGAC AGAGAAGCCG ATGAGATAAC CGAAAAAGGC
ACTGTTATTA TCGCTGGCAT CGGCCGCTTC GGTCAGTTGG TAAACCGTTT TTTACGGGCC
AATAAGATTG ATACTGTGGT GCTAGATCAT CAAATATCTC AAGTCGAAAA CCTTAAAAAG
ATCAATGTTA AAAGCTTTTA CGGCGATGCC ACTAGGCCAG ATCTTCTGCA CACTGCGGGC
ATAGAAAACG CCGCTATGAT CGTTATTGCC ATCGACAATA ATGAACGCGC AGTTGAGCTA
ACAAAGTATG TCAAGCATAC CTACCCTAAG GTCAAAATAT TTGCCCGAGC CTTCGACCGA
GGTCATCACT TTGAACTCAA ACATGCAGGC GCCGATTTTA TTATCAGTGA GACCTATCAC
TCGGCCTTAG AGTTAGGCAA GGAAGCATTG ATATCGATGG GCGTACACCC CTTTAAAGCT
GAGCAGAAAA GGGCCACCCT TCGTGAACTC GAGCTTTGTT ATAAGGATTC TCTCTACGAA
ATGTGGAAGG CAAATAGTGA AGACAGCAAG TACAGTACAC ACTTTAGAGA TCTGTTTATC
GAGCTGGAAA CCGCCATCGC CAAAGCGATG AAGAGTGAAC GCTTTGATGA ACAAGCTAAG
GTAGAGCGAG GCTGGACTCC ACCACCAAAA GGCTATGAGA AACAGTTTAA TGACTCAGAT
GAGGGAGTCT CATGA
 
Protein sequence
MTAYFIQAFI YLCAAVIAVP LAKRLGLGSV LGYLIAGVII GPVIGLVGSE TNTLQHFAEF 
GVVMMLFLVG LELEPRMLWD MRNKLIGLGG LQIGLTTLVI TAGGLYFGLV WSVALTVGLI
FALSSTAIVL QTFSEKDLSK TEGGKNAFSV LLFQDIAVIP MLALIPLLAL PELIEKAQSI
AGQAAEHHEE LSLVAGLPGW AYGIVLLLSI AIVVVGGHYL SRPLFRYVAN SGLREIFTAT
ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIEPFKGLL LGLFFITVGA
GIDFNVLASN IGPVLGLTAG VMLIKALVLF ALAFIFKIKN SDRWLFALSL AQAGEFGFVL
LSYTVQNHVI PSDLAQMLSL VVALSMFLTP GLFIFFDKVI LPKYEHSEND READEITEKG
TVIIAGIGRF GQLVNRFLRA NKIDTVVLDH QISQVENLKK INVKSFYGDA TRPDLLHTAG
IENAAMIVIA IDNNERAVEL TKYVKHTYPK VKIFARAFDR GHHFELKHAG ADFIISETYH
SALELGKEAL ISMGVHPFKA EQKRATLREL ELCYKDSLYE MWKANSEDSK YSTHFRDLFI
ELETAIAKAM KSERFDEQAK VERGWTPPPK GYEKQFNDSD EGVS