| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1421 |
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| Symbol | |
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| ID | 6115661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1784247 |
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| End bp | 1790102 |
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| Gene Length | 5856 bp |
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| Protein Length | 1951 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632909 |
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| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
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| Protein accession | YP_001759808 |
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| Protein GI | 170725782 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.370752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CAAACTCAAA CAGCACTAAA CAGAGCAAGA TTGCCATTGT CGGCCTTGCC
ACACTCTACC CGGATGCTAA GACACCAGGT GAGTTTTGGC AAAACCTGCT AGATAAACGA
GACTCACGAA CCACCTTAAC CAATAAAAAG CTCGGGGCTA ACAGCTGCGA CTACCAAGGT
GTTCAGGGAC AATCTGACCG TTTTTATTGT GATAAAGGCG GCTACATCGA AAACTTCCAC
TTCGATGCAA CAGGCTATCA ACTTCCAAGT GAAAGCTTAA CAGGGTTAGA TGACAGCTTT
CTTTGGGCGC TTGATACCAG CCGAAAAGCA CTCCAGGATG CGGGCATTAA CTTAGGTAGC
GCTTCGTTAG CGCGCACAGG TATCATCATG GGAGCGCTGT CGTTTCCTAC GACTCGCTCG
AACGATCTGT TTCTGCCTAT CTATCACAGC GCCGTTGAGA AGGCGTTGCA AGATAAGCTC
GGAGCAAGTG CTTTTAAGCT AAACCCAACC AATGCCCACA CGAGCCGAGC ACAAGGTGAG
GCCACCTTAG ATAACGCTAA CGGCGCCATC GCCCACAACG CTTCAAAAGT GGTGGCAGAC
GCGCTAGGTT TAGGCGGCGC ACAGCTCAGT CTCGATGCAG CTTGTGCAAG CTCAGTCTAC
TCACTGAAAC TTGCTTGTGA CTACTTAAGT GCAGGCAAAG CCGATGTGAT GCTAGCAGGC
GCAGTCTCAG GGGCTGATCC CTTCTTTATT AACATGGGTT TCTCCATCTT TCACGCCTAC
CCAGATCACG GTATCTCTGT CCCCTTTGAT GGTAACAGCA AAGGGCTATT TGCTGGCGAA
GGTGCTGGCG TACTCGTGCT AAAGCGTTTA GATGATGCCG AGCGTGATGA TGATAATATC
TATGCGGTCG TGAGTGGTGT TGGCTTATCT AACGATGGTA AGGGGCAGTT TGTACTAAGC
CCTAACCCTA AAGGGCAGGT TAAAGCGTTT GAGCGAGCCT ATGCCGCCAG CGACATTGAG
CCTAAAGATA TCGAGGTCAT TGAGTGTCAC GCAACGGGGA CTCCACTGGG TGATAAAATA
GAGCTTACCT CAATGGAGAC CTTCTTTGAA GGTAAGCTCG CTGGCAATCA GGCGCCGCTG
ATAGGCTCAG CTAAATCGAA CTTAGGCCAC CTGTTAACCG CTGCGGGCAT GCCGGGGATC
ATGAAGATGA TTTTCGCCAT GAAAGAGGGT GCACTGCCGC CAAGTATCAA TATTAGCGAT
GCGATATCCT CGCCTAATCA TCTGTTTGGC TCATCAACCT TGCCAAATCA AGTACAACCT
TGGCCAGCTA AAACAGGCAA TGCTCAACGT CACGCTGGCG TTTCTGTATT TGGTTTCGGA
GGCTGTAACG CTCACCTGTT ATTAGAGAGC TATTTACCTC CAAAAGACGC AGCTGGCGCT
CAAGCTACAG GCGCAGTCAA GCAGACTCAG CCAACCGTGA CACCACAGCC GATGAAGATC
ACAGGTCTTG CATCTCACTT TGGTCCCCTA AACAGTATTA ATCAGCTTAA CAGTGCGATT
ACCTCAAACA GCAATGGCTT TATCACCTTG CCGAAAAAGC GCTGGAAAGG GCTAGAGCAA
CACTCAGAGC TATTAGCTGA ATTTGGTTTA AGCGCGGCTC CCAAAGGAGC CTATGTCGAC
AGTTTTGAGC TTGATTTCCT ACGCTTTAAA CTGCCACCAA ATGAAGATGA CCGTCTCATC
TCACAGCAGC TCATGCTGAT GAAGGTCACC GATGAAGCGA TACGAGATGC CAAACTAGAG
CCGGGCCAGA AAGTGGCAGT GTTAGTTGCC ATGGAAACCG AGCTTGAACT GCATCAATTC
CGCGGCCGCG TTAACCTGCA TACTCAACTT AAAGAGAGCC TAGCCGCTGT TGGCGTCACC
TTGGATGAAG ATGAGTATCA AGCATTAGAA GCTATCACCA TGGATAGCGT GCTCGATGCG
GCGAAGCTCA ACCAGTACAC CAGCTTTATC GGCAATATCA TGGCTTCGCG AATCGCATCT
TTGTGGGACT TCCATGGCCC GGCATTTACC ATCTCAGCCG CAGAGCAATC GGTAAGTCGC
TGTATCGATG TCGCGCAAAA TATGATGGTA AGTGAAGCTT TAGATGCCGT TGTTATTGCA
GCAGTGGACC TCTCTGGTAG CTTTGAGCAG GTGATACTGA AAAACAGTGT TGAACCTGTC
TCTATCGACG CAACTGCGGC CCAACACTCT ACCGCTCAAG AAAGTGGAAG CTGGAATGTT
GGTGAAGGTG CAGGTGCAAT CGTGCTTGTA GCTAATGATG CTAAACCAGA AAAATCATAC
GGCACTATCA ATTCGCTAGC CTTTGGCAAC GCCACACAAG CCAATCTGGT TACCGATAAC
TTGCTGACTC AAGCTGGCGC AGATATCAAC ACAGTCAAAG TCGTTGAAAC CAGTATTGCA
CCAGGTAGTC ATCGAAATAC CCCTGTTACA GATCTGTTCC CTAACGCCAT TATCACAAGT
GCAGATGAGC GTGTGGGTCA TAGCTTTGCC GCAGCAGGAA TGGCGAGTCT ACTTCATGGC
CTGCTTAACC TCTCTACTCA GAATCAGTCC CAGAAGCAGC AAGCTGGTAG CCTTTTGGTC
GCCAATAGCA GTGAAGCTCA AATATCGCAG CTGTTAATCA GCCAAACGGC AAGTGAAAAC
AGTGCCCTTA CTAATCGATT AAGTCATGAA CTTAAATCGG ATGCTAAGCA CCAGCTATTG
AAGCAGGTCA CTTTAGGGGG CCGAGATATC TATCAACATA TCCTACAGGC TCCACTAGCA
AGCTTAGCCT CGATACAAGA TAAGTTAGCC ATGAGCAGTA CTTCATCTGT GGTGAAATAC
AAAAAGCCTT TGGTTACACG CACAGCATTA CAGCAAGTTA CTGAGCCTAC GCAGGAAAAA
GCCGCCTCAG TGAACCCTAC TCCAGTATTA GGTAACCCTA TGACGTCTCA AGCTAAAACA
ATAACAGCAC AAGCGCCAAG CAAAACTCTC GATGTTTCTG CGGGTGACTT AAGCGCTTTT
CAGCAAAACC AGCAGCTGAC CCAACAAGCT CACCAAGCAT TTTTAAAGAG TCGCTCAGCC
GGCATGAAAG TGGCTGATGC GCTGTTAAAG CAGCAACTTG CTCAAGTCAC TGGACAAGAG
CAGGTAGCTA GCACAGCAAT ACCGGCACCA GTTTCATACG CCAATACACT CGCTAAAAAA
TCGCCTGTGG CTGCTCACTC TTTACCTCAA GAGAGTGAAC TCAAACCTGA TCACGCTAAC
GTGCCGCCAT ACACTGCGCC GACGCCTGAG CTTAAGCCCT GTATCTGGAA TTATGCCGAT
CTCGTTGAAT ACGCTGAAGG TGATATCGCC AATGTATTTG GCTCAGATTA CGCCATCATC
GACAGCTACT CACGCCGGGT ACGTCTACCG ACCACAGATT ACCTACTGGT GTCTCGCGTC
ACTAAGTTAG ATGCGACCAT GAACGAATTT AAAAAATGCT CAATGACCAC TGAGTATGAC
ATCCCTCTGG ATGCTCCTTA CTTGGTTGAT GGCCAGATCC CGTGGGCTGT TGCGGTTGAA
TCGGGTCAGT GTGACTTGAT GCTCATCAGC TATCTAGGTA TCGATTTTGA GAACAAGGGC
GAGCGCGTTT ACCGCCTATT AGATTGTACC CTCACCTTCC TAGGCGATCT GCCACGTGGC
GGCGATACAC TGCGTTATGA TATTAAGATC AACAACTACG CCCGCAACGG CGACACCTTG
CTGTTCTTCT TCTCATATGA GTGTTTTGTT GGCGATACCA TGATCCTTAA GATGGATGGT
GGCTGTGCTG GCTTCTTCAC CGATGAGGAG CTTGCCGACG GTAAAGGTGT TATCCGCACC
GAAGATGAGA TTAAAGCCCG CAGCTTAGCG GTGAAGAAGA CCTTTAACCC GATTTTAGAT
TGCCCTAAAA CTAGCTTTAG CTATGGTGAC ATCCATAAAC TGCTAACGGC TGATATCGAA
GGCTGTTTCG GTGCAAGTCA TGCAGGCCCA GCCCAACCAT CACTGTGTTT CGCATCAGAA
AAGTTCCTGA TGATTGAGCA GGTCAGCAAG GTTGAGCGTA ATGGCGGCAC ATGGGGACTT
GGACTAATCG AAGGTCATAA GCAGTTAGAA CCAGATCACT GGTACTTCCC ATGTCATTTC
CAGGGCGACC AAGTGATGGC TGGCTCATTA ATGGCTGAAG GCTGTGGCCA GTTGTTGCAG
TTCTTTATGT TGCATTTAGG CATGCACACT CAAACCAAAA ATGGACGCTT CCAGCCACTT
GAAAATGCAT CACAGCAGGT CCGTTGTCGC GGACAGGTAC TGCCGCAATC AGGCACGCTA
ACCTACCGTA TGGAAGTGAC GGAAATAGGC TTTAGCCCAC GTCCATACGC TAAGGCAAAT
ATCGATATCA TCCTAAATGG CAAGCCAGTA GTGGACTTCC AAAACTTAGG TGTGATGATA
AAAGAGGAAG ATGAGTGTAC TCGCTATCCG CTAGCGTCTC TTAATAAAGA GTCGGCTCAC
GCAGCGAGCT CTTCTCCTAA AGCTTACCAG CCAGCATCAG CGAACGCGCC ATTAATGGCC
CAAATTCCAG ATCTGACTAA AGCGCCAAAC AAGGGCGTGA TCCCGATTTC ACACGTTGAA
GCGCCAATCA CACCGGATTA CCCGAACCGT GTACCCGATA CCGTGCCATT TACGCCGTAT
CACATGTTTG AGTTTGCTAC AGGTAACATC GAAAACTGTT TCGGACCTGA GTTCTCAATC
TACCGCGGCA TGATCCCACC ACGTACTCCC TGTGGCGATC TGCAGGTCAC CACACGCGTT
ATCGAAGTCA ACGGCAAGCG CGGCGACTTT AAGAAGCCAT CTTCATGTAT CGCTGAATAT
GAAGTGCCAA CCGATGCCTG GTACTTTGAT AAAAATAGTC ACCATGCTGT GATGCCCTAC
TCTATTTTGA TGGAGATATC CCTGCAACCA AACGGTTTCA TCTCAGGTTA CATGGGGACC
ACACTTGGCT TCCCAGGTCT TGAGCTGTTC TTCCGTAATT TAGACGGTAG CGGTGAGCTA
CTACGCGAAG TCGATCTGCG TGGTAAAACT ATCAAGAATG ACTCACGTCT ACTGTCAACC
GTTATGGCTG GCACCAACAT TATCCAAAGC TTTAGCTTCG AGCTAAGCAC AGATGGTGAG
CCATTCTATC GAGGCACTGC AGTATTTGGT TACTTCAAAG GTGATGCGCT TAAAGATCAA
CTTGGCCTTG ATAACGGTAA AGTGACACAA CCTTGGCACG TCGCTAAAGG AATTGCAGCA
GACACTAAAG TTAACCTACT CGATAAGAGT GGTCGTCATT TCACAGCCCC AGCGGGTAAA
CCACACTACC GTCTTGCAGG TGGTCAACTG AACTTTATCG ACTCGGTTGA GATTGTCGAT
AATGGCGGCA CTGAAGGATT AGGCTACCTG TACGCTGAGC GCACTATCGA CCCTAGTGAC
TGGTTCTTCC AGTTCCACTT CCACCAAGAT CCGGTAATGC CAGGCTCTTT AGGTGTTGAA
GCAATTATCG AAACCATGCA AGCTTACGCC ATCAGTAAAG ACTTGGGCGC TGGATTTAAC
AATCCAAAGT TTGGTCAAAT ATTATCGAAC ATCAAGTGGA AGTATCGCGG TCAGATCAAC
CCACTGAATA AGCAGATGTC GATGGATGTC AGCATCACCT CGGTCAAAGA TGAAAATGGC
AAGAAGGTGA TCACAGGTAA TGCGAGTCTA AGTAAAGATG GGCTGCGTAT TTACGAAGTT
TTTGATATCG CAATCTCCAT CGAAGAAGCT CTTTAA
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| Protein sequence | MSSSNSNSTK QSKIAIVGLA TLYPDAKTPG EFWQNLLDKR DSRTTLTNKK LGANSCDYQG
VQGQSDRFYC DKGGYIENFH FDATGYQLPS ESLTGLDDSF LWALDTSRKA LQDAGINLGS
ASLARTGIIM GALSFPTTRS NDLFLPIYHS AVEKALQDKL GASAFKLNPT NAHTSRAQGE
ATLDNANGAI AHNASKVVAD ALGLGGAQLS LDAACASSVY SLKLACDYLS AGKADVMLAG
AVSGADPFFI NMGFSIFHAY PDHGISVPFD GNSKGLFAGE GAGVLVLKRL DDAERDDDNI
YAVVSGVGLS NDGKGQFVLS PNPKGQVKAF ERAYAASDIE PKDIEVIECH ATGTPLGDKI
ELTSMETFFE GKLAGNQAPL IGSAKSNLGH LLTAAGMPGI MKMIFAMKEG ALPPSINISD
AISSPNHLFG SSTLPNQVQP WPAKTGNAQR HAGVSVFGFG GCNAHLLLES YLPPKDAAGA
QATGAVKQTQ PTVTPQPMKI TGLASHFGPL NSINQLNSAI TSNSNGFITL PKKRWKGLEQ
HSELLAEFGL SAAPKGAYVD SFELDFLRFK LPPNEDDRLI SQQLMLMKVT DEAIRDAKLE
PGQKVAVLVA METELELHQF RGRVNLHTQL KESLAAVGVT LDEDEYQALE AITMDSVLDA
AKLNQYTSFI GNIMASRIAS LWDFHGPAFT ISAAEQSVSR CIDVAQNMMV SEALDAVVIA
AVDLSGSFEQ VILKNSVEPV SIDATAAQHS TAQESGSWNV GEGAGAIVLV ANDAKPEKSY
GTINSLAFGN ATQANLVTDN LLTQAGADIN TVKVVETSIA PGSHRNTPVT DLFPNAIITS
ADERVGHSFA AAGMASLLHG LLNLSTQNQS QKQQAGSLLV ANSSEAQISQ LLISQTASEN
SALTNRLSHE LKSDAKHQLL KQVTLGGRDI YQHILQAPLA SLASIQDKLA MSSTSSVVKY
KKPLVTRTAL QQVTEPTQEK AASVNPTPVL GNPMTSQAKT ITAQAPSKTL DVSAGDLSAF
QQNQQLTQQA HQAFLKSRSA GMKVADALLK QQLAQVTGQE QVASTAIPAP VSYANTLAKK
SPVAAHSLPQ ESELKPDHAN VPPYTAPTPE LKPCIWNYAD LVEYAEGDIA NVFGSDYAII
DSYSRRVRLP TTDYLLVSRV TKLDATMNEF KKCSMTTEYD IPLDAPYLVD GQIPWAVAVE
SGQCDLMLIS YLGIDFENKG ERVYRLLDCT LTFLGDLPRG GDTLRYDIKI NNYARNGDTL
LFFFSYECFV GDTMILKMDG GCAGFFTDEE LADGKGVIRT EDEIKARSLA VKKTFNPILD
CPKTSFSYGD IHKLLTADIE GCFGASHAGP AQPSLCFASE KFLMIEQVSK VERNGGTWGL
GLIEGHKQLE PDHWYFPCHF QGDQVMAGSL MAEGCGQLLQ FFMLHLGMHT QTKNGRFQPL
ENASQQVRCR GQVLPQSGTL TYRMEVTEIG FSPRPYAKAN IDIILNGKPV VDFQNLGVMI
KEEDECTRYP LASLNKESAH AASSSPKAYQ PASANAPLMA QIPDLTKAPN KGVIPISHVE
APITPDYPNR VPDTVPFTPY HMFEFATGNI ENCFGPEFSI YRGMIPPRTP CGDLQVTTRV
IEVNGKRGDF KKPSSCIAEY EVPTDAWYFD KNSHHAVMPY SILMEISLQP NGFISGYMGT
TLGFPGLELF FRNLDGSGEL LREVDLRGKT IKNDSRLLST VMAGTNIIQS FSFELSTDGE
PFYRGTAVFG YFKGDALKDQ LGLDNGKVTQ PWHVAKGIAA DTKVNLLDKS GRHFTAPAGK
PHYRLAGGQL NFIDSVEIVD NGGTEGLGYL YAERTIDPSD WFFQFHFHQD PVMPGSLGVE
AIIETMQAYA ISKDLGAGFN NPKFGQILSN IKWKYRGQIN PLNKQMSMDV SITSVKDENG
KKVITGNASL SKDGLRIYEV FDIAISIEEA L
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