Gene Swoo_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1416 
Symbol 
ID6115656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1778607 
End bp1779365 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content41% 
IMG OID641632904 
Producthypothetical protein 
Protein accessionYP_001759803 
Protein GI170725777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT TAATCGTATT CATAGGGCAT GTATGCCCTA TCGACGTAGA AAAAAACATG 
AAAATACAGA CACTATTTTT AAACACTATT TTGATACTAA TACCCTTTTC GTTTAGTACC
TTAGTAAGTG CCCAAGAGGA AGGGAAAAAC CTTTATGAAG AGGCCTGTGC AGCTTGTCAC
TCTATCTCAG ACAATAGCAA TATCACTCTT TCACAACGAC TAAAAGAGAG AGCGCCAACA
CTGTTTTACG CAGGCAATAA GTTTAATCCA GACTGGCTAG AGAATTGGTT AGTTAACCCA
AAGCGTCTTC GTCCCGGTGG TCACTTCTTT TTAGACAATG TCATTGTGAC TGAAGATGGT
GATGCTATCG ATGAGAGTAA ATTGACTGAG CATATTGCCG TTAATGCAGT TCAAGCAAAA
CAACTCACTG AATATTTAAT GGCTCAGACC CCCAAGTCAG ATCTTATCGC ACTAGAAAGT
GTCACCTTAG GCAAAGCAAA TCGGGCACTA GGTGAGAAAG ACTTTCACAA ATTTAAAGGC
TGTGGTTCAT GCCATCAGAG TGAAGATGGC TATGGTGGTG TTTCAGCCCC TGAACTATAC
AGCTCAATGA ACCGCCTACA ACCGGCCTTC ATCTCATCCT ACATTCGCTA TCCAGAAAAG
TGGGATCCTA AAACACTCAT GCCTAACCGC CATTTAAATG AGAGTTCTAT CGAAAAGTTA
TTGAACTACC TCAACCTGAT AACGGAGCAA CCAGAATGA
 
Protein sequence
MNNLIVFIGH VCPIDVEKNM KIQTLFLNTI LILIPFSFST LVSAQEEGKN LYEEACAACH 
SISDNSNITL SQRLKERAPT LFYAGNKFNP DWLENWLVNP KRLRPGGHFF LDNVIVTEDG
DAIDESKLTE HIAVNAVQAK QLTEYLMAQT PKSDLIALES VTLGKANRAL GEKDFHKFKG
CGSCHQSEDG YGGVSAPELY SSMNRLQPAF ISSYIRYPEK WDPKTLMPNR HLNESSIEKL
LNYLNLITEQ PE