| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1412 |
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| Symbol | |
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| ID | 6115652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1773104 |
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| End bp | 1775647 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632900 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001759799 |
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| Protein GI | 170725773 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT TCCGCGCTAA TTCATTAACG CTTGCGATAG GTATTGCTCT TGGGAGCACC
AGTGTGGCTG TTCAGGCTGC CGATGAGGCA TCAGCTGAGC AAGAGGTGGA GACCATTTCA
ATATTGGGTA CTAGGGTCTC GAATCGAACT GCAACAGAGT CTGCGGTTCC CGTTGATATT
ATCAGTGCCG AAAGCTTAAC TCGTGGAGGT TTTACCGAGC TAGGACAGAG TCTGCAAGCC
AGTGTTCCTT CGTTTAATTT CAGTCGAACT CAAGTTTCTG ATGGCTCAGA TCTATTTCGT
CCCGCCACAC TGCGTGGACT ACAACCGGAT CAGACTCTGG TATTGATAAA TGGTAAGCGT
CGCCATAATC AAGCGATCTT TGGCCTTAAT GGGACTGTTG GTGCCGGAGC GGCGGGAACG
GATATGAATG CCATTCCGCT GATTGCACTT AAAGATGTAC AGGTGTTGCG TGACGGTGCA
GCGGCGCAAT ATGGATCGGA CGCCATCGCT GGTGTGATTA ACTTATCTCT TAGAGACAGC
ACTGATGTGA CCTCAGGTTA TATTCAGGGT GGGAGTACGG GTGAGGGCGA TGGTGACAAC
TACTCCCTTG GCTTAAACAC AGGTTTTGAC CTTGGTGATG ATGGCGGCTT TATTAATCTC
TCCTTTGAGT ACCGTGATGC CGATGGCACT AACCGTGCTC AAAGGGATAT GGGAGGCTCT
TCAACAGTAC CTAACGGGAG TGCACTCTCC GATGAGGTAC GTTGGAGCCA AGGTAATGCT
GATTCAGAAT TTAAATCGAT GTTCTACAAT GCCATGATGT CGGTGGGGGA GTTTGAGCTT
TACTCTTTCG GTGGCTATTC AAATCGAACT GCATTAGGCA ATGGTTTTTG GCGTAATTTT
GATGAAGCTG CGAAGGTTGT ACCTCAAGTT TATCCCGATG GTTTTCTGCC GCGTATTTTT
AATGAGGCGC AAGATACCTC AATTGCCGCT GGTTTAAGAG GGGATATTAA TGATGATTGG
CAGTTTGATC TCTCTGCTGT TTATGGTCAG AACCGTTATG ATTTTGATTC GAGGAACAGT
ATCAATGCTT CCTATGCTGC CGAATATCTT TATAACAATC CTGGTGCAAC CGATGCAGAG
ATAGCCGCTA ACTCAGGGCC AACTTCTGGC TATTCAGGTG GTTTCCGCTT CGACCAAACC
ACTTTAAATG TTGATATTAG TGGGATTGTG GATACAGGTT GGGACTCGCC GATATATGTG
GCGTTTGGTA GTGAGTACCG CAGTGAAAAC TATGAGATTG TGGCCGGTGA ACTGGCCTCT
TACTCCTGTG GTAGCTCAAA TGCGAACAAC TCTTTTCCCT CTGTGATGGA TCCTGAAGTA
TTTGCTGGTT GTGGTTTTCA GGCTTACCCA GGTTTAAGGC CCGATGCGGC GGGTGAGGCT
GACAGAAGCA GTTATGCCTT CTACCTAGAT CTTGAAACTA ATTTGCTTGA TGACTGGATG
CTAGGCGCTG CGCTTCGTTT CGAAGACTTC TCAGATTCAG GCAATGATCT CGTCGGTAAG
CTGTCATCAC GTTTCGATGT CACTGATTCA TTTGCAATAC GTGGCGCAGT CTCTACAGGC
TTTAGAGCGC CATCACTGCA GCAAAGTGCT TATACCGCTT ATACGACGAA CTTGGGACCA
GGCGGTGTAC TATCTAGCTC CTTTACTGCA ACGGCAGGCT CTGATTTTCC TTCTGCACTT
GGGGTAGACA GTTTGAAGCT TGAAACCTCA AAAAACCTAA GTTTAGGTTT TGTGCTTAAT
CCCACCGATG ATCTTTCTGT GACCTTAGAT GCTTATCGAA TTGAGATTGA AGATAGAATT
ACCTTAGGTA GTCTTCTGTC TGCTGAAGAT GTAGATTTTA GTTCTGAAGC GGTTGCAGCC
TTAGCTGCGA CGGGGGCAGA GCAAGCCAAC TACTTCTCTA ATTCGGTTAA CTCAACCACT
CAAGGCGTGG ATCTGATTGT GACTCATCAG GCTGAGCTAT TTGGCGGCGA TTTAAATACT
ACCTTTGCGG GGAACCTTAA TGAGACCAAA ATTGACAGTG TGAATGCACC TGAGGGGATC
CCTGAGGATG TTGCACTGGA TGACCTACAA CGTAGCTTCC TAACCGATGG TCAGCCAAAA
GAGCGTGCGA CTTTAACGTT TGATTACAGT AAAAATGACT GGCAAGCCAT GGTTAGGGCT
AATTACTTTG GCGAAACCGA CGTGACCTAC TTTGGTAATG AGCATATTGG CTTACCTGGT
TTTCTTTCTC CCACAGGTTC ATTTAAACCG ACGAGTACTG TAGAAGCCGC GGTATTGGTG
GACATTAACT TAGAGTATCA TTTTACAGAT TCTTTAAGTG TCTCCGCGGG GGTGAATAAT
ATTTTCGATG TGACCCCCGA TGAACTTGGC GCCGATGAGC CACTCGATTT TATTACTAAT
CAGGCATTTC AATACCCTGT AAGGGCGCTG CCATATGGGT TCGATGGGAT CACTTACACA
GCCAAGGTTA ACTTTACCTT TTAG
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| Protein sequence | MKIFRANSLT LAIGIALGST SVAVQAADEA SAEQEVETIS ILGTRVSNRT ATESAVPVDI
ISAESLTRGG FTELGQSLQA SVPSFNFSRT QVSDGSDLFR PATLRGLQPD QTLVLINGKR
RHNQAIFGLN GTVGAGAAGT DMNAIPLIAL KDVQVLRDGA AAQYGSDAIA GVINLSLRDS
TDVTSGYIQG GSTGEGDGDN YSLGLNTGFD LGDDGGFINL SFEYRDADGT NRAQRDMGGS
STVPNGSALS DEVRWSQGNA DSEFKSMFYN AMMSVGEFEL YSFGGYSNRT ALGNGFWRNF
DEAAKVVPQV YPDGFLPRIF NEAQDTSIAA GLRGDINDDW QFDLSAVYGQ NRYDFDSRNS
INASYAAEYL YNNPGATDAE IAANSGPTSG YSGGFRFDQT TLNVDISGIV DTGWDSPIYV
AFGSEYRSEN YEIVAGELAS YSCGSSNANN SFPSVMDPEV FAGCGFQAYP GLRPDAAGEA
DRSSYAFYLD LETNLLDDWM LGAALRFEDF SDSGNDLVGK LSSRFDVTDS FAIRGAVSTG
FRAPSLQQSA YTAYTTNLGP GGVLSSSFTA TAGSDFPSAL GVDSLKLETS KNLSLGFVLN
PTDDLSVTLD AYRIEIEDRI TLGSLLSAED VDFSSEAVAA LAATGAEQAN YFSNSVNSTT
QGVDLIVTHQ AELFGGDLNT TFAGNLNETK IDSVNAPEGI PEDVALDDLQ RSFLTDGQPK
ERATLTFDYS KNDWQAMVRA NYFGETDVTY FGNEHIGLPG FLSPTGSFKP TSTVEAAVLV
DINLEYHFTD SLSVSAGVNN IFDVTPDELG ADEPLDFITN QAFQYPVRAL PYGFDGITYT
AKVNFTF
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