| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1407 |
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| Symbol | |
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| ID | 6115647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1767290 |
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| End bp | 1768309 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632895 |
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| Product | aminocarboxymuconate-semialdehyde decarboxylase |
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| Protein accession | YP_001759794 |
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| Protein GI | 170725768 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTA CCGATATTCA CTCACACTTT ATTCCACGTG AATGGGAAAA CTTGCAGAAC
AAGTTTGGCG GCGATAACTG GCCCTGGATG GCCCATAAAA CCGCTGCCGG TGAAAACCTT
AATAGTCACA CAAGCAGCGC CATGTTAATG CGAGGCAGTC AAGAGTTCAG GCCTGTTTAC
TCCGCCTGTT GGGATCCACA AATTCGTCTA GATGAGATGG ACCGTGACGG GGTCGATAAA
CAGATCATCT CCGCAACCCC TATTCTCTTT GCCTATGATC GCCCAGTAGC CCAGGCCAGT
TATTGTGCCC AGCTCTTTAA CGATGCCGCC CTTGAGATCT GCGCTAAGAA CAACAAACGT
CTGTTCGCCC TCGCTCAGGT TCCCCTACAA GATATCGATG CCTCCTGCAT TGAGGTCAGC
CGTGCTAAAG CCTGTGGCCA TGTAGGTGTG CAAATTGGTA ACCATGTAGG CGAGAAAAAC
ATGGACGATA AAGGGATACT CACCTTCCTG CAGCACTGTG CAAGTGAAGA TATTCCAGTA
TTTGTACACC CCTGGGACAT GATGGCTGCT GATCGCACCA AAGATTACAT GATGGGTTGG
ACCGTAGGCA TGCCGGCGGA AACCCAGCTG TCTATCGTGT CAATGATATT AGGTGGCGGC
TTCGATCATG TCAGTGAAAA ACTCAAAATC TGTTTCGCCC ATGGTGGTGG CTCATTTGCT
TTTCTACTTG GCCGCCTTGA GAACGCTTGG ATCCACAAGG ATATTGCCCG AGGACACTCA
CAACATCCGC CCAGCCACTA TCTCAATCGC TTCTACCTCG ACACTGCCGT GTTTGATCAC
GATGCCTTAG CACTGCTGGT GAAAAAGATG GGGCCAGATA GGCTGATGTT TGGCACCGAT
TACCCTTTCC CCTTAGGCGA ACAGCAGATG GGGCAATTAA TCAAAAGTGC TAGCGAACTA
GATCAGCAAA CCAAGCAGAA GCTGTTATCT GGTAACGCCG AACAATTTTT TAACCTTTAA
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| Protein sequence | MKVTDIHSHF IPREWENLQN KFGGDNWPWM AHKTAAGENL NSHTSSAMLM RGSQEFRPVY
SACWDPQIRL DEMDRDGVDK QIISATPILF AYDRPVAQAS YCAQLFNDAA LEICAKNNKR
LFALAQVPLQ DIDASCIEVS RAKACGHVGV QIGNHVGEKN MDDKGILTFL QHCASEDIPV
FVHPWDMMAA DRTKDYMMGW TVGMPAETQL SIVSMILGGG FDHVSEKLKI CFAHGGGSFA
FLLGRLENAW IHKDIARGHS QHPPSHYLNR FYLDTAVFDH DALALLVKKM GPDRLMFGTD
YPFPLGEQQM GQLIKSASEL DQQTKQKLLS GNAEQFFNL
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