| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1403 |
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| Symbol | |
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| ID | 6115643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1762915 |
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| End bp | 1763775 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632891 |
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| Product | tryptophan 23-dioxygenase |
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| Protein accession | YP_001759790 |
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| Protein GI | 170725764 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATGCC CACATAATAA TCCTAAACAA GGCAATACCC GAGAGATGGA AGACTCCATC
CATACCGACT TTAACAACGA TATGTCCTAC GGTGATTACC TCTGTCTTGA GCAGGTACTA
TCTGCCCAGC ATCCACAATC AGAGGTTCAC GATGAGATGC TGTTTATTAT CATTCATCAA
ACCAGTGAGT TGTGGCTAAA ATTGGCTGGC AACGAGCTAG ACACTATGAT CCATAATGTT
CAACAGGGGG ATTTTAGCCA CGCCTTTAAG GTGATCTCCC GAGTCAAACA GATCTTAAAC
CAGCTGACTC AATCCTGGAA CATACTGTCG ACCTTAACCC CTGTTGACTA CCTAAAATTT
AGGGATGCAT TGGGCCGCTC CTCCGGCTTT CAATCCTACG GTTATCGTAA GATTGAGTTC
CTACTGGGCA ATAAAAATGC CGATCTTATT CAAGTTCATG AGAGTAATGA ACAGGTACAC
AGTGAACTGC AGGGGATCCT CGAGCGCCCT AGCCTCTATG ATGAAGTCAT TCGCGTGCTA
CATAAGCAGG GATTGCCAAT TGATGACAGC GCCCTTAATC GTGATTTCAC TCAGCCTTAT
CAAGCCAATG AATCAGTACT CAATGCTTGG CTTAGTGTCT ATCGCAACGC CGATGAACAT
TTTGAGCTTT ATGAGCTGGC AGAGAAGTTA ATTGATATTG AGGACGCCTT TCAGCAGTGG
CGCTTTAAGC ATATGTATGC CGTTCAGCGC ATCATAGGCA ATAAGATGGG CACAGGCGGC
TCATCGGGTG TAAGCTTTCT TAAAAAAGCC TTGGATATCA GCTTTTTCCC TGAACTGTTC
GAGCTAAGGA CACATCTGTA A
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| Protein sequence | MVCPHNNPKQ GNTREMEDSI HTDFNNDMSY GDYLCLEQVL SAQHPQSEVH DEMLFIIIHQ
TSELWLKLAG NELDTMIHNV QQGDFSHAFK VISRVKQILN QLTQSWNILS TLTPVDYLKF
RDALGRSSGF QSYGYRKIEF LLGNKNADLI QVHESNEQVH SELQGILERP SLYDEVIRVL
HKQGLPIDDS ALNRDFTQPY QANESVLNAW LSVYRNADEH FELYELAEKL IDIEDAFQQW
RFKHMYAVQR IIGNKMGTGG SSGVSFLKKA LDISFFPELF ELRTHL
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