Gene Swoo_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1402 
Symbol 
ID6115642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1761940 
End bp1762914 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID641632890 
Productputative esterase 
Protein accessionYP_001759789 
Protein GI170725763 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTA CAGATAGGGA TAAGCTTGAG ATAGCTCCTT TTGACAAGGC ACCTCTCGAA 
AAAGAGGCTC TTGAAATAGA GTATTCTCCC AGTAGCTGTG TCGATGACAT CATGATCTAT
ATTCAGCAGT ATATAGATCA AAGCCAAACC GTTATCGAGC AAGCAGTTAG TGAAAACTCA
GTCTTAAGAG ACCTTAAATA CGCTGACAGC GATAACACAG GTAAGGATGA AGTACTCGAT
CTATTTCTTC CGACTCATCA CAGTGCAAGA GGCAAAAAGC TACATGTATA CATTCATGGC
GGCTACTGGC AGGAGCTCAC CAAGGAGGAG TCTGCATTTG CCGCTCGCGC ATTTCAGCAA
GCGGGCCACT ACTTCGCCGT TATCAATTAC AGCTTGGCAC CTAAGGCGAG TTTAACCGAA
ATCGTAGAGC AGAACCGCCG CGCCCTTGCG TGGCTCGTAT CTCATGCCGA TGAACTCGGT
TTCGATGCCG ATGAGGTATA CCTATCGGGC AGCTCAGCCG GCGCTCATCT GTGTTTGATG
ATGTTACAAA CCAATTGGCA AGGCTATTTG ACCAGTAACC ATCTAAGTAA TAATGACTTA
GCTAATAGCC CTGTTACATT TGCTCCTGAA AAGCCCTTTA TCAAAGGCAT CTGCGCCGTC
AGTGGCATCT ATGATATTGC GCCTCTGCTG CACACAACGA TTAATGATCC GCTGCAGCTA
ACTGAGCAGG AGGTCGAAGC TAACAGTCCT TTGCGCCATG CCACTCAGCA TCACTGCCCA
GTGATTATCG CCTTTGGTGA TAATGAAACC AGTGAGTTTA AGCGCCAAAG TTTGGCCATG
TTGGCTCAAC TTGAGGATCA AGGGTTTGAT ATTACCTTTA GCGAAATTGC AGGTCGAAAC
CATTTCGATG TTATTTTGGA TTTAGGTATT GAGGGGAGAT GGTTGTTTGA GGAAGTGCTC
AAACAGATGG GTTAG
 
Protein sequence
MSATDRDKLE IAPFDKAPLE KEALEIEYSP SSCVDDIMIY IQQYIDQSQT VIEQAVSENS 
VLRDLKYADS DNTGKDEVLD LFLPTHHSAR GKKLHVYIHG GYWQELTKEE SAFAARAFQQ
AGHYFAVINY SLAPKASLTE IVEQNRRALA WLVSHADELG FDADEVYLSG SSAGAHLCLM
MLQTNWQGYL TSNHLSNNDL ANSPVTFAPE KPFIKGICAV SGIYDIAPLL HTTINDPLQL
TEQEVEANSP LRHATQHHCP VIIAFGDNET SEFKRQSLAM LAQLEDQGFD ITFSEIAGRN
HFDVILDLGI EGRWLFEEVL KQMG