| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1401 |
|---|
| Symbol | |
|---|
| ID | 6115641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1760723 |
|---|
| End bp | 1761574 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641632889 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001759788 |
|---|
| Protein GI | 170725762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.961468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC GAGCGTTAAA TAGTTTGGAA AATATGTCGA CTGTAATAGA AATAGATTTC
TCTAAACGGT TAGAGATAAA AATAGATAAT AAGCAACCTG TTGGTTTAGA AGATTTGTCT
CTGTCTCTTT TGTCATTCAA TAAACAATTC CATAAATTTG TCGAGTCAGA AACTGATGCT
TTGACGGATA TAGGTTCCGA GTTGTTGATC AAAGAAGTAC GAAAAGGCTC TATTATCGTT
GAACTAGTGT CTCAATCTGC TCCTATAGTG CCGTTACTTT GGGATGGTGG TTCATTAGCT
CAATGGGCAT CAGTTGTTCA AAATACATGT AATTGGCTTT TGGGAAAAAG TGATAATTCG
CCTAAAAACT TAACAAAACA AGATTTGCAA GAATGGAATA AAATCGTTGA ACCAATTGCC
AAAGACAACG GTTCACAAAT GAACATTAAT GTTTCTGATG GCGGTAAGGT TATCAATCAA
TTTATCCTCA GCTCTAATGA AGCGGCAGCG ATACAAAATC GGATAGGACG GCTAGTTGAA
GATATTGATA CACCAGTAGA AAATAGGCAT TTAAAAAAGG TTATGTACTG GTATCAAACA
AAGTTTGATC GAAATTCTGA TACTGGTAAT AAAGCAATTA TCGATGATAT TTCAAAGTCT
GCACTTAAAG TTATTTTCGA AAACAATGCC CTAAAAGAAG AAATGCTGCA CCCAGATCCA
TCTTTGGGTA AACCTTGGCA AGAATTAGCT TTTATCGTTG ATGTTGAGGT TCAGACCGTC
AGAGGTAAAC CAAAAATGTA CAATGTATTG AATTATTATC CTGAATATAC TTTCGATCCT
GATGAACCAT AA
|
|---|
| Protein sequence | MINRALNSLE NMSTVIEIDF SKRLEIKIDN KQPVGLEDLS LSLLSFNKQF HKFVESETDA
LTDIGSELLI KEVRKGSIIV ELVSQSAPIV PLLWDGGSLA QWASVVQNTC NWLLGKSDNS
PKNLTKQDLQ EWNKIVEPIA KDNGSQMNIN VSDGGKVINQ FILSSNEAAA IQNRIGRLVE
DIDTPVENRH LKKVMYWYQT KFDRNSDTGN KAIIDDISKS ALKVIFENNA LKEEMLHPDP
SLGKPWQELA FIVDVEVQTV RGKPKMYNVL NYYPEYTFDP DEP
|
|---|
| |