| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1398 |
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| Symbol | |
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| ID | 6115638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1755870 |
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| End bp | 1757396 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632886 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001759785 |
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| Protein GI | 170725759 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5178] U5 snRNP spliceosome subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.84341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC TTTGGAAACA ATGGCTAACC AGCGTCTTGC TGGCTTTAGC ACTTGCAGCC
TGTGGAGGAG GCGGTGGTTC AAGCACTCCT GAAGAGAAAG TAGAGATAGC ACCGCCACCA
CCACCACCAC CACCACCACC ACCACCACCA CCACCACCAC CACCACCACC ACCACCACCA
CCGGAAACAG TGGGAATGTC GGGCAAGGTA ATAGATGGTT ATGTCTCTGG CGCGACGGTC
TGGTTGGATA TCAATGGCAA TGGCACTTTT GATACAGGTA GTGAGCCTTC TACCCTATCG
GGTGCTGCTG GAGACTATGC ATTTGAGTTC ACTCAAGAGC AAGCCGACTG TGTACCTTAC
GCCACCTTGT ATGTCGATGT GCCTGTTGGG GCTATTGATG AAGACTTAGG TGAGGTAACC
GAAGCCTATC AAATGTCGAT CCCCCCCTCT ATCACACCAT TGAACGATGA TGATATTAAA
AATATCTCCC CTTTGACCAC AGTGCTCTGG GAGCAGGTAG CTGAAAAATT AAAAGAAACT
AACACCCCCA ATTTAAGCTG TGAGAACTTG AAGCAAGATA CACAGCTTCG AGCAGAGCTT
GTGCAGGAGC TCAGCGAGGT GATGAACAAT CTTGTTTATC ATTACAACCT CTCTGAGGCG
CAAATTTATG CTGACTTTAT CGCAGATGCA GATAGTGAAG CCTATGATAT TGCTCAGGCC
ATTGTCACAG GGCTTAAAGC CTCCTACGCC CATAAAGGCA AGTTAGAGGC AGAGTTTCCT
GATGCTCGTG AGATCCGTGT GGTTATCTAC CAAGATAGCG ATAAAGATAA CGATTTTAGC
TTCGAGCAGG CTTGGTACCG TTCAACATAT ATCTCTACTG CAACAGGTTA CGATTTGGAA
GAGGTGAAAC TCACTGCAGA TCTGTCAGGT ATTGATATTG TGCTTACTGA CTTAGTCCGT
GTTGATGCCC CTTGGGGTGA TCAAACATTA GCAGGTCAGT TCAGCACGCG TGAAGATGCC
TACTATAATA CCGATGGGAC TTACCGCTGC TCTTCATTTG AAAAGGTTAG CTTTAAACAA
GGCGGCATTA CCTTTGAACT GAGCAACACA TCATCAAGCA AAGACAACTC TGACACTATC
GATGGCTGTG TACATATTGC TAGTACGCCA TATTCACGTA ATCACAAAAT CTCTTTTATA
GAAGAGGGGA AGAGCTATTT TGCCCGTTTT TTCTTCAGAG AAGCACAGGC TGAATTTAAC
TCCCTCCCTG ACTGGGTAGA CTTCAAAGAT AAAGCTGAAC AGTTAAACGC TGCCGAGCTT
ATCGAACATC TGTCCCTACT ACCAAGAGGT TGGGATGATG AGGTATTAGT CGATACCGAG
CTATGGCGTA AACGCATGTG GTTCGACAAT ATCCAAGTCG ACAAAGACAG TCATGACAAC
TGGACAAGGG CAACCCTGCA AGAGGATAAC ACTAGAGTTT ATGAATGCAG TACAGATGGT
ATTAACTGGG AGCCTTGCCC TTCTTAG
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| Protein sequence | MNKLWKQWLT SVLLALALAA CGGGGGSSTP EEKVEIAPPP PPPPPPPPPP PPPPPPPPPP
PETVGMSGKV IDGYVSGATV WLDINGNGTF DTGSEPSTLS GAAGDYAFEF TQEQADCVPY
ATLYVDVPVG AIDEDLGEVT EAYQMSIPPS ITPLNDDDIK NISPLTTVLW EQVAEKLKET
NTPNLSCENL KQDTQLRAEL VQELSEVMNN LVYHYNLSEA QIYADFIADA DSEAYDIAQA
IVTGLKASYA HKGKLEAEFP DAREIRVVIY QDSDKDNDFS FEQAWYRSTY ISTATGYDLE
EVKLTADLSG IDIVLTDLVR VDAPWGDQTL AGQFSTREDA YYNTDGTYRC SSFEKVSFKQ
GGITFELSNT SSSKDNSDTI DGCVHIASTP YSRNHKISFI EEGKSYFARF FFREAQAEFN
SLPDWVDFKD KAEQLNAAEL IEHLSLLPRG WDDEVLVDTE LWRKRMWFDN IQVDKDSHDN
WTRATLQEDN TRVYECSTDG INWEPCPS
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