Gene Swoo_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1395 
Symbol 
ID6115635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1754092 
End bp1754607 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content38% 
IMG OID641632883 
Producthypothetical protein 
Protein accessionYP_001759782 
Protein GI170725756 
COG category[S] Function unknown 
COG ID[COG3797] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.751897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAT ATACCATCTT ACTTAGAGGA GTCAATGTTG GTGGAAAAAA CTTACTGCCA 
ATGAAGGAAC TTAAGGCGCT TTTGGAAAAT AATGGCTTTA ATAACGTCAC CACCTACATT
CAAAGCGGCA ATCTACTCTT GACTGGCCAT GAGCACCCAG AGAAAAAGAT CTGTGAATTA
ATTCAAACAC ACTTTGGCTT TACTCCTGAA ACCCTTGTTC TTACTAAAGA TGAGTTTAAA
CTTGCTATCT CAAACTGCCC CTTTCAAAAG GGTGAAAATA AGTTTATCCA TTTCTACTTT
TGTAAAGATA GTCCTAAAGC TGATACGACA AAAATATTAG CTTTAGCATC TCAAACTGAA
CGCTTTGAAC TGCTCGATAA AATCTTCTAT CTACATGCCC CTGATGGTAT CGGTCGCTCT
AAACTGGTTG CCAATATTGA GTCTTGCTTA GGCGTTAGGG CAACAGGGCG AAACCTAAAT
ACAATTAATA AACTCAACGA AATGATGGAC AAATAG
 
Protein sequence
MNRYTILLRG VNVGGKNLLP MKELKALLEN NGFNNVTTYI QSGNLLLTGH EHPEKKICEL 
IQTHFGFTPE TLVLTKDEFK LAISNCPFQK GENKFIHFYF CKDSPKADTT KILALASQTE
RFELLDKIFY LHAPDGIGRS KLVANIESCL GVRATGRNLN TINKLNEMMD K