| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1392 |
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| Symbol | |
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| ID | 6115632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1748009 |
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| End bp | 1748800 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632880 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_001759779 |
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| Protein GI | 170725753 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0975696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCAG CAGAAATAGA GCAGCTAGGA TTGGAGTTAT ACCGGGCATT ACGTAATCAA
GAGATGTTAC CACCGCTCAC CGAACGTGAG CCACAACTGA CCTTAGATGA TGCTTATCAA
GTCTCACAGT GTTTTCTACA GCATAGGCTC AATGATGGCG AGCGCGTTGT CGGTAAAAAA
ATAGGACTCA CCAGTAAAGT GGTTCAAGAG ATGCTAGGAG TTCATCAACC CGATTTTGGC
TTTCTCACCG ATGCCATGAT GTTTGAGTCA GGCAGTGAGA TCCCCTTCAA TTCACCTCTC
ATTCAAGCCA AATCCGAAGG AGAGATCGCC TTTATCTTAA AGGCCGATCT TAAAGGGCCA
AATGTGACAC CACAAGATGT CATCGATGCC ACCGAAAGTG TCGCGGCCTG CTTTGAGATT
GTAGATTCTC GAGTCAAAGA TTGGAAAATC AAGATAGAAG ACACTGTTGC AGATAATGCC
TCTTGCGGCA TCTTTGTCAT GGGTGATGAG CGTGTATCAC CTCAGGATGT GGATTTTGAA
AACTGCCAAA TGGTGATAAA AAACCGAGGA GAGGTGGTCG CCACAGGACA AGGCTCTGCA
GCACTAGGCT CTCCATTAAA TTGTGTTGCC TGGCTTGCCA ACACATTGGG CGATTATGGC
ATCAGTCTCA ATGCAGGCGA CATTATCTTA TCGGGCTCAC TTGCAGCCAT GCTCCCCTGT
CAGGCGGATG ATGATATGAG TGTTGAAATC GAGGGAATTG GCACCGCCAG TTATCGCTTT
ATCACAACCT AA
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| Protein sequence | MKPAEIEQLG LELYRALRNQ EMLPPLTERE PQLTLDDAYQ VSQCFLQHRL NDGERVVGKK
IGLTSKVVQE MLGVHQPDFG FLTDAMMFES GSEIPFNSPL IQAKSEGEIA FILKADLKGP
NVTPQDVIDA TESVAACFEI VDSRVKDWKI KIEDTVADNA SCGIFVMGDE RVSPQDVDFE
NCQMVIKNRG EVVATGQGSA ALGSPLNCVA WLANTLGDYG ISLNAGDIIL SGSLAAMLPC
QADDDMSVEI EGIGTASYRF ITT
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